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Author
Ideker, Trey
2
Sharan, Roded
2
Stockwell, Brent R.
2
Bulutoglu, Beyza
1
Deng, Lei
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Biochemistry and Molecular Biophysics
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Biological Sciences
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Chemistry
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Chemical Engineering
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Subject
Protein-protein interactions
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9
Biochemistry
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Systems biology
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Amino acid sequence
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Bioinformatics
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Theses
5
Articles
4
Degree Level
Doctoral
5
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2021
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1.
Machine Learning Applications in Proteins: Interaction Prediction and Structure Prediction
Sun, Mengzhen
2021
Theses
Chemistry
Machine learning
Amino acid sequence
Protein-protein interactions
2.
Resonance-energy-transfer-based fluorescence imaging and free energy perturbation calculation
Xu, Fang
2018
Theses
Chemistry, Physical and theoretical
Protein-protein interactions
Fluorescence
Energy transfer
Biochemistry
3.
Engineering Biomolecular Interfaces for Applications in Biotechnology
Bulutoglu, Beyza
2017
Theses
Biotechnology
Protein-protein interactions
Protein engineering
Enzymes
Peptides
Biomolecules
Chemical engineering
Biomedical engineering
4.
A computational interactome and functional annotation for the human proteome
Garzon Canas, Jose I.; Deng, Lei; Murray, Diana; Shapira, Sagi; Petrey, Donald S.; Honig, Barry
2016
Articles
Computational biology
Proteomics
Protein-protein interactions
Systems biology
5.
Autophagy-linked FYVE protein mediates the turnover of mutant huntingtin and modifies pathogenesis in mouse models of Huntington’s disease
Fox, Leora Mestel
2016
Theses
Nervous system--Degeneration
Huntington's disease
Protein-protein interactions
Neurosciences
6.
Interaction of Human Laminin Receptor with Sup35, the [PSI+] Prion-Forming Protein from S. cerevisiae: A Yeast Model for Studies of LamR Interactions with Amyloidogenic Proteins
Pampeno, Christine; Derkatch, Irina L.; Meruelo, Daniel
2014
Articles
Protein-protein interactions
Prion diseases
Yeast
Biochemistry
7.
Towards the integration of structural and systems biology: structure-based studies of protein-protein interactions on a genome-wide scale
Zhang, Qiangfeng Cliff
2012
Theses
Bioinformatics
Biophysics
Systems biology
Protein-protein interactions
Genomes
8.
PathBLAST: a tool for alignment of protein interaction networks
Kelley, Brian P.; Yuan, Bingbing; Sharan, Roded; Lewitter, Fran; Stockwell, Brent R.; Ideker, Trey
2004
Articles
Genomics
Protein-protein interactions
Genetics
9.
Conserved pathways within bacteria and yeast as revealed by global protein network alignment
Kelly, Brian P.; Sharan, Roded; Karp, Richard; Sittler, Taylor; Root, David; Stockwell, Brent R.; Ideker, Trey
2003
Articles
Saccharomyces cerevisiae
Helicobacter pylori
Molecular biology
Protein-protein interactions
Biology