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1. Integration of Functional Genomic Data in Genetic Analysis

Chen, Siying
2021
Theses
BioinformaticsMedical genetics--ResearchHuman genomeEpigeneticsAutism spectrum disorders--Genetic aspects

2. Enhanced and controlled chromatin extraction from FFPE tissues and the application to ChIP-seq

Zhong, Jian; Ye, Zhenqing; Clark, Chad R.; Lenz, Samuel W.; Nguyen, Justin H.; Yan, Huihuang; Robertson, Keith D.; Farrugia, Gianrico; Zhang, Zhiguo; Ordog, Tamas; Lee, Jeong-Heon
2019
Articles
ChromatinEpigeneticsDiseases--Causes and theories of causationTissues

3. Is breast cancer a result of epigenetic responses to traffic-related air pollution? A review of the latest evidence

Sahay, Debashish; Terry, Mary Beth; Miller, Rachel L.
2019
Articles
Breast--CancerBreast--Cancer--Environmental aspectsBreast--Cancer--Risk factorsAir--PollutionEpigeneticsDNA--Methylation

4. Meta-analysis of expression and methylation signatures indicates a stress-related epigenetic mechanism in multiple neuropsychiatric disorders

Zhu, Kaiyi; Ou Yang, Tai-Hsien; Dorie, Vincent Joseph; Zheng, Tian; Anastassiou, Dimitris
2019
Articles
Neurobehavioral disordersPathologyEpigeneticsMethylationStress (Psychology)--Physiological aspectsSystems biology

5. Prenatal maternal antidepressants, anxiety, and depression and offspring DNA methylation: epigenome-wide associations at birth and persistence into early childhood

Cardenas, Andres; Faleschini, Sabrina; Cortes Hidalgo, Andrea; Rifas-Shiman, Sheryl L.; Baccarelli, Andrea A.; DeMeo, Dawn L.; Litonjua, Augusto A.; Neumann, Alexander; Felix, Janine F.; Jaddoe, Vincent W. V.; El Marroun, Hanan; Tiemeier, Henning; Oken, Emily; Hivert, Marie-France; Burris, Heather H.
2019
Articles
AntidepressantsDNA--MethylationPrenatal careMaternal health servicesEpigeneticsPediatrics

6. Statistical Methods for Epigenetic Data

Wang, Ya
2019
Theses
BiometryEpigeneticsDNA--MethylationStatistics

7. Analysis of repeated leukocyte DNA methylation assessments reveals persistent epigenetic alterations after an incident myocardial infarction

Ward-Caviness, Cavin K.; Agha, Golareh; Chen, Brian H.; Pfeiffer, Liliane; Wilson, Rory; Wolf, Petra; Gieger, Christian; Schwartz, Joel; Vokonas, Pantel S.; Hou, Lifang; Just, Allan C.; Bandinelli, Stefania; Hernandez, Dena G.; Singleton, Andrew B.; Prokisch, Holger; Meitinger, Thomas; Kastenmüller, Gabi; Ferrucci, Luigi; Baccarelli, Andrea A.; Waldenberger, Melanie; Peters, Annette
2018
Articles
Myocardial infarctionDNA--MethylationEpigeneticsGene expression

8. A pan-cancer analysis of driver gene mutations, DNA methylation and gene expressions reveals that chromatin remodeling is a major mechanism inducing global changes in cancer epigenomes

Youn, Ahrim; Kim, Kyung In; Rabadan, Raul; Tycko, Benjamin; Shen, Yufeng; Wang, Shuang
2018
Articles
DNA--MethylationGene expressionCancer--Genetic aspectsTumorsEpigenetics

9. BRDT is an essential epigenetic regulator for proper chromatin organization, silencing of sex chromosomes and crossover formation in male meiosis

Manterola, Marcia; Brown, Taylor; Oh, Min Young; Garyn, Corey Michael; Gonzalez, Bryan Jose; Wolgemuth, Debra J.
2018
Articles
GeneticsEpigeneticsMeiosisChromatinSex chromosomes

10. Breast cancer family history and allele-specific DNA methylation in the Legacy Girls Study

Wu, Hui-Chen; Do, Catherine; Andrulis, Irene L.; John, Esther M.; Daly, Mary; Buys, Saundra; Chung, Wendy K.; Knight, Julia A.; Bradbury, Angela R.; Keegan, Theresa H. M.; Schwartz, Lisa; Krupska, Izabela; Miller, Rachel L.; Santella, Regina M.; Tycko, Benjamin; Terry, Mary Beth
2018
Articles
EpigeneticsDNA--MethylationBreast--Cancer--Genetic aspectsBreast--Cancer--Environmental aspectsLeucocytes