1. Discovery of RNA-guided DNA integration by CRISPR-associated transposases Klompe, Sanne Eveline 2023 Theses Molecular biologyDNA-protein interactionsRNA-protein interactionsBacterial genomesImmunologyProkaryotesEscherichia coli
2. Epigenetic targeting of metabolic and lineage abnormality in cancer Karagiannis, Dimitrios 2023 Theses ChromatinMolecular biologyGeneticsEpigeneticsGene expressionCancer--TreatmentLungs--CancerEsophagus--CancerCell metabolism--Regulation
3. Evolutionary rate determinants and functional optimization of proteins Usmanova, Dinara R. 2023 Theses Evolution (Biology)Molecular biologyGeneticsProteins
4. Identifying Critical Regulatory Elements of Alternative Splicing Recinos, Yocelyn 2023 Theses BiologyMolecular biologyGenetic engineeringRNA splicingExons (Genetics)Mammals--Genetics
5. Investigating the determinants of resistance to quinine and chloroquine using a novel Plasmodium falciparum genetic cross Kanai, Mariko 2023 Theses MicrobiologyGeneticsMolecular biologyPlasmodium falciparumQuinine--Therapeutic useMalaria--TreatmentDrug resistance
6. NMR Studies of the GCN4 Transcription Factor and Hox DNA Consensus Sequences Crawley, Timothy 2023 Theses BiophysicsMolecular biologyDNABootstrap (Statistics)Nuclear magnetic resonance spectroscopyDNA-binding proteins
7. Non-canonical WDR33 Isoforms: Characterization, Regulation, and Functional Significances in STING-Mediated Innate Immune Responses Liu, Lizhi 2023 Theses Molecular biologyImmunologyBiochemistryAmino acid sequenceGene expressionMessenger RNAOligomerizationInterferon
8. Rie1 and Sgn1 form an RNA-binding complex that enforces the meiotic entry cell fate decision Gaspary, Alec 2023 Theses BiologyCytologyMolecular biologyYeast--GeneticsSaccharomyces cerevisiae--Genetic aspectsRNA-protein interactionsMeiosis
9. SPIDR: The development and application of a highly multiplexed CLIP-seq method Wolin, Erica 2023 Theses Molecular biologyRNA-protein interactionsRNA--Analysis
10. The role of ER-mitochondria contact sites in the regulation of glucose metabolism: a tale of two mitochondria and its relevance to amyotrophic lateral sclerosis Tamucci, Kirstin Arianna 2023 Theses BiochemistryMolecular biologyNutritionGlucose--MetabolismMitochondriaMitochondrial membranesEndoplasmic reticulumMotor neuronsAmyotrophic lateral sclerosis
11. Understanding the molecular, cellular, and circuit defects characterizing the early stages of Alzheimer’s disease Virga, Daniel Michael 2023 Theses NeurosciencesAlzheimer's disease--PathophysiologyAlzheimer's disease--EtiologyCytologyMolecular biologyNervous system--DiseasesHippocampus (Brain)SynapsesDendritesMitochondrial pathology
12. Analysis of Conformational Continuum and Free-energy Landscapes from Manifold Embedding of Single-particle Cryo-EM Ensembles of Biomolecules Seitz, Evan Elliott 2022 Theses Molecular biologyBiomoleculesElectron microscopy—Data processingMachine learningRiemannian manifoldsGibbs' free energyPath analysis (Statistics)RibosomesCOVID-19 (Disease)--Data processing
13. A non-canonical Hippo signaling pathway regulates DeltaNp63 in cancer cells Low Calle, Ana Maria 2022 Theses Molecular biologySquamous cell carcinomaTranscription factors
14. Bacterial Genome Engineering with CRISPR RNA-Guided Transposons Vo, Phuc Hong 2022 Theses Molecular biologyMicrobiologyBacterial geneticsBacterial genomesTherapeuticsEscherichia coli--GeneticsTransposonsDNACRISPR (Genetics)
15. Characterization of pathogenic BicD2 mutations in vitro and in vivo. Yi, Julie Young Joo 2022 Theses CytologyMolecular biologyNeurosciencesMicrotubulesEukaryotic cellsDyneinMutagenesisKinesin
16. Developing and applying novel imaging methods for human diseases Bekdash, Ramsey Azeez 2022 Theses Molecular biologyBiologyFluorescence microscopyElectrophysiologyDiagnostic imagingCOVID-19 (Disease)--TreatmentMetabolism
17. Noncoding translation mitigation Kesner, Jordan 2022 Theses Biology--ClassificationMolecular biologyCytologyEukaryotic cells--GeneticsAmino acid sequenceGenomesNucleotide sequenceRNA
18. Nucleolar transcription and its connections to nucleolar homeostasis and mitochondrial stress responses Feng, Shuang 2022 Theses Molecular biologyNucleic acidsHomeostasisMitochondriaCarcinogenesisNervous system--Diseases
19. Regulation of synapse density by Pumilio RNA-binding proteins Randolph, Lisa Kathryn 2022 Theses NeurosciencesCytologyMolecular biologyNeuronsSynapsesRNA-protein interactions
20. Single-cell Analysis of Alopecia Areata Lee, Yoo Jin 2022 Theses ImmunologyMolecular biologyAlopecia areata--Animal modelsMiceBaldnessPathologyCytokinesLymphocytesNucleotide sequenceCancer--Treatment