Subject: Bioinformatics / Type: Articles / Language: English | Search Results

1. Survivin (BIRC5) Peptide Vaccine in the 4T1 Murine Mammary Tumor Model: A Potential Neoadjuvant T Cell Immunotherapy for Triple Negative Breast Cancer: A Preliminary Study

: Burkholz, Scott R.; Herst, Charles V.; Carback, Richard T.; Harris, Paul Emerson; Rubsamen, Reid M.
: 2023
: Articles
: Breast--Cancer--TreatmentImmunotherapyBioinformaticsHigh-throughput nucleotide sequencingMedicine

2. Paired SARS-CoV-2 spike protein mutations observed during ongoing SARS-CoV-2 viral transfer from humans to minks and back to humans

: Burkholz, Scott; Pokhrel, Suman; Kraemer, Benjamin R.; Mochly-Rosen, Daria; Carback, III, Richard T.; Hodge, Tom; Harris, Paul Emerson; Ciotlos, Serban; Wang, Lu; Herst, C. V.; Rubsamen, Reid M.
: 2021
: Articles
: COVID-19 (Disease)ZoonosesMinksBioinformaticsMutation (Biology)

3. Characterization of kinase gene expression and splicing profile in prostate cancer with RNA-Seq data

: Feng, Huijuan; Li, Tingting; Zhang, Xuegong
: 2018
: Articles
: Prostate--CancerGene expressionRNA splicingProtein kinasesGenomicsBioinformatics

4. HT-eQTL: integrative expression quantitative trait loci analysis in a large number of human tissues

: Li, Gen; Jima, Dereje; Wright, Fred A.; Nobel, Andrew B.
: 2018
: Articles
: BioinformaticsGene expressionTissues

5. Life cycle synchronization is a viral drug resistance mechanism

: Neagu, Iulia A.; Olejarz, Jason; Freeman, Mark; Rosenbloom, Daniel I. S.; Nowak, Martin A.; Hill, Alison L.
: 2018
: Articles
: Drug resistanceViruses--EvolutionBioinformaticsComputational biology

6. Pharmacological risk factors associated with hospital readmission rates in a psychiatric cohort identified using prescriptome data mining

: Shameer, Khader; Perez-Rodriguez, M. M.; Bachar, Roy; Li, Li; Johnson, Amy; Johnson, Kipp W.; Glicksberg, Benjamin S.; Smith, Milo R.; Readhead, Ben; Scarpa, Joseph; Jebakaran, Jebakumar; Kovatch, Patricia; Lim, Sabina; Goodman, Wayne; Reich, David L.; Kasarskis, Andrew; Tatonetti, Nicholas P.; Dudley, Joel T.
: 2018
: Articles
: PharmacologyBioinformaticsHospitals--Admission and discharge--Data processingPsychiatric hospital patientsHealth services administration--Data processingBig data

7. Bayesian estimation of scaled mutation rate under the coalescent: a sequential Monte Carlo approach

: Ogundijo, Oyetunji Enoch; Wang, Xiaodong
: 2017
: Articles
: BioinformaticsBayesian statistical decision theoryMonte Carlo methodGenealogyGenetics

8. Early recognition of multiple sclerosis using natural language processing of the electronic health record

: Chase Jr., Herbert; Mitrani, Lindsey Rebecca; Lu, Gabriel G.; Fulgieri, Dominick J.
: 2017
: Articles
: Medical records--Data processingMultiple sclerosis--DiagnosisMultiple sclerosisBioinformaticsDiagnostic errorsDiagnosis--Computer-assisted instructionNatural language processing (Computer science)

9. Mindboggling morphometry of human brains

: Klein, Arno; Ghosh, Satrajit S.; Bao, Forrest S.; Giard, Joachim; Häme, Yrjö; Stavsky, Eliezer; Lee, Noah; Rossa, Brian; Neto, Elias Chaibub; Keshavan, Anisha; Reuter, Martin
: 2017
: Articles
: Biomedical engineeringImaging systems in biologyBrain--ImagingBioinformatics

10. Orion: Detecting regions of the human non-coding genome that are intolerant to variation using population genetics

: Gussow, Ayal B.; Copeland, Brett; Dhindsa, Ryan; Wang, Quanli; Petrovski, Slave; Majoros, William H.; Allen, Andrew S.; Goldstein, David B.
: 2017
: Articles
: Human genomePopulation geneticsNon-coding RNABioinformaticsGenomics

11. Systematic, network-based characterization of therapeutic target inhibitors

: Shen, Yao; Alvarez, Mariano; Bisikirska, Brygida; Lachmann, Alexander; Realubit, Ronald B.; Pampou, Sergey Yu; Coku, Jorida; Karan Jr., Charles; Califano, Andrea
: 2017
: Articles
: TherapeuticsGene expressionComputational biologyBioinformatics

12. Inference of Ancestral Recombination Graphs through Topological Data Analysis

: Camara, Pablo Gonzales; Levine, Arnold J.; Rabadan, Raul
: 2016
: Articles
: Topology--Data processingEvolution--Mathematical modelsPhylogenyBioinformatics

13. Pathogenic Mutations in Cancer-Predisposing Genes: A Survey of 300 Patients with Whole-Genome Sequencing and Lifetime Electronic Health Records

: He, Karen Y.; Zhao, Yiqing; McPherson, Elizabeth W.; Li, Quan; Wang, Kai; Xia, Fan; Weng, Chunhua; He, Max M.
: 2016
: Articles
: Human geneticsCancer--Genetic aspectsHuman genetics--Data processingMedical records--Data processingGenomicsMedicineGeneticsBioinformatics

14. Real-Time Predictions of Reservoir Size and Rebound Time during Antiretroviral Therapy Interruption Trials for HIV

: Hill, Alison L.; Rosenbloom, Daniel; Goldstein, Edward; Hanhauser, Emily; Kuritzkes, Daniel R.; Siliciano, Robert F.; Henrich, Timothy J.
: 2016
: Articles
: Viruses--ReproductionHIV infections--TreatmentHighly active antiretroviral therapyBioinformaticsVirologyPublic health

15. Smartphone Applications to Support Tuberculosis Prevention and Treatment: Review and Evaluation

: Iribarren, Sarah J.; Schnall, Rebecca; Stone, Patricia W.; Carballo-Diéguez, Alex
: 2016
: Articles
: Medical careBioinformaticsBiomedical engineeringTuberculosis--PreventionWireless communication systems in medical careMedicine

16. 3D Pharmacophoric Similarity improves Multi Adverse Drug Event Identification in Pharmacovigilance

: Vilar Varela, Santiago; Tatonetti, Nicholas P.; Hripcsak, George M.
: 2015
: Articles
: Drugs--Side effectsMedical careBioinformaticsMedicine

17. ABC Transporters and the Proteasome Complex Are Implicated in Susceptibility to Stevens–Johnson Syndrome and Toxic Epidermal Necrolysis across Multiple Drugs

: Nicoletti, Paola; Bansal, Mukesh; Lefebvre, Celine; Guarnieri, Paolo; Shen, Yufeng; Pe’er, Itsik; Califano, Andrea; Floratos, Aristidis
: 2015
: Articles
: Drugs--Side effectsATP-binding cassette transportersGene expressionGenetic regulationApoptosisToxic epidermal necrolysisBiology--ClassificationBioinformaticsGenetics

18. Cartographic Analysis of Antennas and Towers: A Novel Approach to Improving the Implementation and Data Transmission of mHealth Tools on Mobile Networks

: Brown III, William; Ibitoye, Mobolaji Omowumi; Bakken, Suzanne R.; Schnall, Rebecca; Balán, Iván C.; Frasca, Timothy Joel; Carballo-Diéguez, Alex
: 2015
: Articles
: Medical careBioinformaticsBiomedical engineeringWireless communication systems in medical careMedicine

19. Context Sensitive Modeling of Cancer Drug Sensitivity

: Chen, Bo-Juen; Pe'er, Dana; Litvin, Oren; Ungar, Lyle
: 2015
: Articles
: Drugs--Dose-response relationshipDrug interactionsMelanoma--TreatmentCancer--Chemotherapy--Mathematical modelsCancer cells--Effect of drugs onOncologyBioinformatics

20. Development and validation of a classification approach for extracting severity automatically from electronic health records

: Boland, Mary Regina; Tatonetti, Nicholas P.; Hripcsak, George
: 2015
: Articles
: PhenotypeData miningHealth status indicatorsMedical records--Data processingBioinformatics

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