Academic Unit: Biochemistry and Molecular Biophysics | Search Results

1. Abl Family Tyrosine Kinases Are Essential for Basement Membrane Integrity and Cortical Lamination in the Cerebellum

: Qiu, Zhaozhu; Cang, Yong; Goff, Stephen P.
: 2010
: Articles
: Molecular biologyNeurosciencesMicrobiology

2. Abl-interactor-1, A Novel SH3 Protein Binding to the Carboxy-terminal Portion of the Abl Protein, Suppresses v-abl Transforming Activity

: Shi, Yanggu; Alin, Kimona; Goff, Stephen P.
: 1995
: Articles
: CytologyGeneticsVirology

3. Accelerating the Original Profile Kernel

: Hamp, Tobias; Goldberg, Tatyana; Rost, Burkhard
: 2013
: Articles
: Pattern recognition systemsKernel functionsProteins--Analysis--MethodologyMolecular biology

4. Accurate and sensitive quantification of protein-DNA binding affinity

: Rastogi, Chaitanya; Rube, Hans Tomas; Kribelbauer, Judith Franziska; Crocker, Justin; Loker, Ryan Edmund; Martini, Gabriella D.; Laptenko, Oleg; Freed-Pastor, William Allen; Prives, Carol L.; Stern, David L.; Mann, Richard S.; Bussemaker, Harmen J.
: 2018
: Articles
: Transcription factorsDNA-protein interactionsProtein bindingProbabilities--Mathematical models

5. Accurate proteome-wide protein quantification from high-resolution 15N mass spectra

: Kryglyak, Leonid; Singh, Mona; Perlman, David H.; Tavazoie, Saeed; Caudy, Amy A.; Ruse, Christian; Amini, Sasan; Bloom, Joshua S.; Khan, Zia
: 2011
: Articles
: BiochemistryMolecular biology

6. A Competition Mechanism for a Homeotic Neuron Identity Transformation in Caenorhabditis Elegans

: Gordon, Patricia Marie
: 2015
: Theses
: Caenorhabditis elegansCaenorhabditis elegans--GeneticsCell divisionCell differentiationHomeobox genes

7. A computational interactome and functional annotation for the human proteome

: Garzon Canas, Jose I.; Deng, Lei; Murray, Diana; Shapira, Sagi; Petrey, Donald S.; Honig, Barry
: 2016
: Articles
: Computational biologyProteomicsProtein-protein interactionsSystems biology

8. Activation of GTP hydrolysis in mRNA-tRNA translocation by elongation factor G

: Li, Wen; Liu, Zheng; Koripella, Ravi Kiran; Langlois, Robert; Sanyal, Suparna; Frank, Joachim
: 2015
: Articles
: HydrolysisRibosomesGuanosine triphosphataseMolecular biologyBiochemistry

9. A High-Throughput Strategy for Dissecting Mammalian Genetic Interactions

: Stockman, Victoria B.; Ghamsari, Lila; Lasso Cabrera, Gorka; Honig, Barry; Shapira, Sagi; Wang, Harris H.
: 2016
: Articles
: RNAMammals--Molecular geneticsNucleotide sequenceSystems biologyMolecular geneticsCloningGeneticsBiology--Classification

10. A Kazal-Type Serine Protease Inhibitor from the Defense Gland Secretion of the Subterranean Termite Coptotermes formosanus Shiraki

: Negulescu, Horia; Guo, Youzhong; Garner, Thomas P.; Goodwin, Octavia Y.; Henderson, Gregg; Laine, Roger A.; Macnaughtan, Megan A.
: 2015
: Articles
: Proteins--StructureProteins--SecretionRhinotermitidaeAmino acid sequenceProtease inhibitorsFormosan subterranean termiteBiochemistryEntomology

11. Allele-Specific Knockdown of ALS-Associated Mutant TDP-43 in Neural Stem Cells Derived from Induced Pluripotent Stem Cells

: Nishimura, Agnes L.; Scotter, Emma L.; Abdelgany, Amr; Shum, Carole; Sardone, Valentina; Wright, Jamie; Lee, Youn-Bok; Chen, Han-Jou; Bilican, Bilada; Carrasco, Monica; Maniatis, Tom; Chandran, Siddharthan; Gallo, Jean-Marc; Rogelj, Boris; Shaw, Christopher E.
: 2014
: Articles
: Neural stem cellsCell differentiationSmall interfering RNAMorphology

12. ALS-associated mutant FUS induces selective motor neuron degeneration through toxic gain of function

: Sharma, Aarti; Lyashchenko, Alexander K.; Lu, Lei; Ebrahimi Nasrabady, Sara; Elmaleh, Margot; Mendelsohn, Monica; Nemes, Adriana; Tapia, Juan Carlos; Mentis, George Z.; Shneider, Neil
: 2016
: Articles
: Nervous system--Degeneration--Molecular aspectsAmyotrophic lateral sclerosisNeurologyMedicineMolecular biologyNeurosciences

13. An Analysis of the Essential Chromatin Factor Zinc Finger Protein 1 (ZFP-1), and a Study of the Involvement of RNAi factors in Histone Processing in Caenorabditis Elegans

: Anastasiades Avgousti, Daphne Christina
: 2012
: Theses
: BiochemistryBiophysicsCaenorhabditis elegansChromatinHistonesRNANucleosomes

14. An Automated Microwell Platform for Large-Scale Single Cell RNA-Seq

: Yuan, Jinzhou; Sims, Peter A.
: 2016
: Articles
: Nucleotide sequenceGene expression

15. A Sixth Modality of Infectious Disease: Contagious Cancer from Devils to Clams and Beyond

: Metzger, Michael; Goff, Stephen P.
: 2016
: Articles
: Parasites--EvolutionCancerImmunologic diseasesEpidemiology

16. Astrocyte pathology and the absence of non-cell autonomy in an induced pluripotent stem cell model of TDP-43 proteinopathy

: Serio, Andrea; Bilican, Bilada; Barmada, Sami J.; Ando, Dale Michael; Zhao, Chen; Siller, Rick; Burr, Karen; Haghi, Ghazal; Story, David; Nishimura, Agnes Lumi; Carrasco, Monica A.; Phatnani, Hemali P.; Shum, Carole; Wilmut, Ian; Maniatis, Tom; Shaw, Christopher E.; Finkbeiner, Steven; Chandran, Siddharthan
: 2013
: Articles
: NeurosciencesBiochemistry

17. A Survey of 6,300 Genomic Fragments for cis-Regulatory Activity in the Imaginal Discs of Drosophila melanogaster

: Jory, Aurelie E.; Estella, Carlos; Giorgianni, Matt W.; Slattery, Matthew; Laverty, Todd R.; Rubin, Gerald M.; Mann, Richard S.
: 2012
: Articles
: Genetics

18. Asynchronous Transcriptional Silencing of Individual Retroviral Genomes in Embryonic Cells

: Schlesinger, Sharon; Meshorer, Eran; Goff, Stephen P.
: 2014
: Articles
: CytologyGeneticsVirology

19. Atf5 Links Olfactory Receptor Induced Stress Response to Proper Neuronal Function

: Kahiapo, Jerome Keoki
: 2020
: Theses
: CytologyBiochemistryMolecular biologyOlfactory receptor genesSmellSensory neuronsMammals

20. A transformation-defective mutant of Abelson murine leukemia virus lacks protein kinase activity

: Witte, Owen N.; Goff, Stephen P.; Rosenberg, Naomi; Baltimore, David
: 1980
: Articles
: Retroviruses--EnzymesMolecular biologyMitogen-activated protein kinasesVirologyMicrobiology

21. Bacterial Adaptation through Loss of Function

: Hottes, Alison K.; Freddolino, Peter L.; Khare, Anupama; Donnell, Zachary N.; Liu, Julia C.; Tavazoie, Saeed
: 2013
: Articles
: Microbial mutationNonsense mutationBacteriaGeneticsMicrobiologyBiology--Classification

22. Balance Control Mediated by Vestibular Circuits Directing Limb Extension or Antagonist Muscle Co-activation

: Murray, Andrew; Croce, Katherine; Belton, Timothy; Akay, Turgay; Jessell, Thomas M.
: 2018
: Articles
: Motor ability--Physiological aspectsMotor ability--TestingNeurochemistryMolecular biologyVestibular nucleiEquilibrium (Physiology)Neurosciences

23. Basal-like breast cancer: modeling its initiation and characterizing novel EGFR variants

: Pires, Maira Moura
: 2012
: Theses
: BiologyOncologyBreast--CancerTumor suppressor proteinsCarcinogenesis

24. Biomolecular NMR spectroscopy: Application to the study of the piRNA-pathway protein GTSF1, and backbone and side-chain spin relaxation methods development

: O'Brien, Paul
: 2019
: Theses
: BiophysicsBiochemistryNuclear magnetic resonance spectroscopyProteins--StructureMolecular dynamics

25. C-Abl Is Required for the Development of Hyperoxia-Induced Retinopathy

: Nunes, Irene; Zanetta, Lucia; Higgins, Rosemary D.; Shamamian, Peter; Goff, Stephen P.
: 2001
: Articles
: BiochemistryOphthalmologyMedicine

26. Cell type-specific CLIP reveals that NOVA regulates cytoskeleton interactions in motoneurons

: Yuan, Yuan; Xie, Shirley; Darnell, Jennifer C.; Darnell, Andrew J.; Saito, Yuhki; Phatnani, Hemali P.; Murphy, Elisabeth A.; Zhang, Chaolin; Maniatis, Tom; Darnell, Robert B.
: 2018
: Articles
: Motor neuronsCytoskeletonSeptinsRNA splicingBiology

27. cis-regulatory architecture of a short-range EGFR organizing center in the Drosophila melanogaster leg

: Newcomb, Susan Elizabeth; Voutev, Roumen; Jory, Aurelie E.; Delker, Rebecca; Slattery, Matthew; Mann, Richard S.
: 2018
: Articles
: Drosophila melanogaster--GeneticsGrowth factors--ReceptorsCloningBiologyGene expression

28. Concentration-Dependent Exchange of Replication Protein A on Single-Stranded DNA Revealed by Single-Molecule Imaging

: Gibb, Bryan; Ye, Ling Feng; Gergoudis, Stephanie C.; Kwon, YoungHo; Niu, Hengyao; Sung, Patrick; Greene, Eric C.
: 2014
: Articles
: Protein bindingDNA--MetabolismSaccharomyces cerevisiae--GeneticsGenetics

29. Construction of mutants of Moloney murine leukemia virus by suppressor-linker insertional mutagenesis: positions of viable insertion mutations

: Lobel, Leslie I.; Goff, Stephen P.
: 1984
: Articles
: Insertional mutagenesisMouse leukemia virusesAntioncogenesImmunologyMicrobiologyGenetics

30. Cooperative interactions enable singular olfactory receptor expression in mouse olfactory neurons

: Monahan, Kevin; Schieren, Ira; Cheung, Jonah; Mumbey-Wafula, Alice Mary; Monuki, Edwin S.; Lomvardas, Stavros
: 2017
: Articles
: GeneticsOlfactory receptor genesGene expressionOlfactory nerve

31. Correlating protein function and stability through the analysis of single amino acid substitutions

: Bromberg, Yana; Rost, Burkhard
: 2009
: Articles
: BioinformaticsBiochemistry

32. CysZ: Structural and Functional Studies of a Novel Sulfate Transport Protein

: Assur, Zahra
: 2013
: Theses
: CytologyCarrier proteinsBiochemistryBiophysics

33. Deep sequencing with longitudinal sampling of a VRC01-like-antibody response in a chronically infected individual

: Mascola, J. R.; Kwong, P. D.; Mullikin, J. C.; Wu, L.; Nabel, G. J.; Connors, M.; NISC, C.; Zhang, Z.; Zhang, B.; Zhu, J.; Longo, N.; Wu, X.; Shapiro, Lawrence S.
: 2012
: Presentations (Communicative Events)
: Nucleotide sequenceLongitudinal methodHIV antibodiesVirologyMolecular biology

34. Determination of the Critical Concentration of Neutrophils Required to Block Bacterial Growth in Tissues

: Li, Yongmei; Karlin, Arthur; Loike, John D.; Silverstein, Samuel C.
: 2004
: Articles
: Bacterial growthBiophysics--ResearchNeutrophilsMedicineMicrobiologyMolecular biology

35. Developing a molecular dynamics force field for both folded and disordered protein states

: Robustelli, Paul; Piana, Stefano; Shaw, David Elliot
: 2018
: Articles
: Molecular dynamicsComputer simulationProteinsProtein folding

36. Developmental control of lateralized neuron size in the nematode Caenorhabditis elegans

: Lockery, Shawn; Hobert, Oliver; Goldsmith, Andrew; Sarin, Sumeet
: 2010
: Articles
: NeurosciencesMolecular biology

37. Developmental Pathway of the MPER-Directed HIV-1-Neutralizing Antibody 10E8

: Soto, Cinque; Ofek, Gilad; Joyce, M. Gordon; Zhang, Baoshan; McKee, Krisha; Longo, Nancy S.; Yang, Yongping; Huang, Jinghe; Parks, Robert; Eudailey, Joshua; Lloyd, Krissey E.; Alam, S. Munir; Haynes, Barton F.; Mullikin, James C.; Connors, Mark; Mascola, John R.; Shapiro, Lawrence S.; Kwong, Peter D.; NISC Comparative Sequencing Program
: 2016
: Articles
: Neutralization (Chemistry)ImmunoglobulinsPhylogenyHIV infectionsBiochemistryBiology

38. Developmental Regulation of Chromatin Conformation by Hox Proteins in Drosophila

: Angelopoulos, Marios; McKay, Daniel J.; Mann, Richard S.
: 2012
: Articles
: BiochemistryBiophysics

39. Differential effects of natural rewards and pain on vesicular glutamate transporter expression in the nucleus accumbens

: Manders, Toby R.; Ziff, Edward B.; Wang, Jing; Turkey, David S.; Lee, Michelle; Xu, Duo; Eberle, Sarah E.; Goffer, Yossef
: 2013
: Articles
: BiochemistryNeurosciences

40. Discovery of RNA-guided DNA integration by CRISPR-associated transposases

: Klompe, Sanne Eveline
: 2023
: Theses
: Molecular biologyDNA-protein interactionsRNA-protein interactionsBacterial genomesImmunologyProkaryotesEscherichia coli

41. Distinctive Genes Determine Different Intramuscular Fat and Muscle Fiber Ratios of the longissimus dorsi Muscles in Jinhua and Landrace Pigs

: Wu, Ting; Zhang, Zhenhai; Yuan, Zhanqin; Lo, Li Jan; Chen, Jun; Wang, Yizhen; Peng, Jinrong
: 2013
: Articles
: Swine--GeneticsMeat--QualityGene expressionGenetic regulationSwine--AnatomyGeneticsVeterinary medicine

42. Distinct Roles of c-Abl and Atm in Oxidative Stress Response Are Mediated by Protein Kinase C δ

: Goff, Stephen P.; Nakayama, Keiko; Nakayama, Keiichi I.; Boast, Sharon; Ishii, Tetsuro; Hu, Yuanyu; Rasheed, Naslin; Wang, Xueying; Li, Baojie
: 2004
: Articles
: Molecular biologyGenetics

43. Divergent Transcriptional Regulatory Logic at the Intersection of Tissue Growth and Developmental Patterning

: Slattery, Matthew; Voutev, Roumen; Ma, Lijia; Nègre, Nicolas; White, Kevin P.; Mann, Richard S.
: 2013
: Articles
: Genetic transcription--RegulationDevelopmental biologyDevelopmental geneticsTissues--GrowthGeneticsMolecular biology

44. Domain structure of the Moloney murine leukemia virus reverse transcriptase: mutational analysis and separate expression of the DNA polymerase and RNase H activities

: Tanese, Naoko; Goff, Stephen P.
: 1988
: Articles
: Mouse leukemia virusesRetroviruses--GeneticsRecombinant proteinsBiochemistryInsertional mutagenesis

45. Dual tRNA mimicry in the Cricket Paralysis Virus IRES uncovers an unexpected similarity with the Hepatitis C Virus IRES

: Pisareva, Vera P.; Pisarev, Andrey V.; Fernández, Israel S.
: 2018
: Articles
: VirologyRNAHepatitis C virusBiochemistry

46. DWARF – a data warehouse system for analyzing protein families

: Fischer, Markus; Thai, Quan; Grieb, Melanie; Pleiss, Jürgen
: 2006
: Articles
: Proteins--Data processingProtein engineeringBioengineering--Data processingData warehousingBioinformatics

47. Dynamic Instability of Genomic Methylation Patterns in Pluripotent Stem Cells

: Ooi, Steen K. T.; Wolf, Daniel; Hartung, Odelya; Agarwal, Suneet; Daley, George Q.; Goff, Stephen P.; Bestor, Timothy H.
: 2010
: Articles
: GeneticsMolecular biologyBiochemistry

48. Efferent Vestibular Neurons Show Homogenous Discharge Output But Heterogeneous Synaptic Input Profile In Vitro

: Mathews, Miranda A.; Murray, Andrew; Wijesinghe, Rajiv; Cullen, Karen; Tung, Victoria W. K.; Camp, Aaron J.
: 2015
: Articles
: NeuronsAction potentials (Electrophysiology)Neural transmissionMembrane potentials (Electrophysiology)Vestibular nucleiNeurosciences

49. Elucidating synergistic dependencies in lung adenocarcinoma by proteome-wide signaling-network analysis

: Bansal, Mukesh; He, Jing; Peyton, Michael; Kustagi, Manjunath; Iyer, Archana; Comb, Michael; White, Michael; Minna, John D.; Califano, Andrea
: 2019
: Articles
: AdenocarcinomaMolecular biologyLungs--Cancer--Molecular aspectsProteomics

50. Embryonic Lethality in Mice Homozygous for a Targeted Disruption of the N-myc Gene

: Charron, Jean; Malynn, Barbara A.; Fisher, Peter; Stewart, Valerie; Jeannotte, Lucie; Goff, Stephen P.; Robertson, Elizabeth J.; Alt, Frederick W.
: 1992
: Articles
: CytologyMolecular biology

51. Endophilins interact with Moloney murine leukemia virus Gag and modulate virion production

: Wang, Margaret; Kim, Wankee; Gao, Guangxia; Torrey, Ted; Morse, Herbert; De Camilli, Pietro; Goff, Stephen P.
: 2003
: Articles
: Molecular biologyVirology

52. Endophilins Interact with Moloney Murine Leukemia Virus Gag and Modulate Virion Production.

: Wang, Margaret Q.; Kim, Wankee; Gao, Guangxia; Morse, Herbert C.; De Camilli, Pietro; Goff, Stephen P.; Torrey, Ted A.
: 2003
: Articles
: Molecular biologyOncologyVirology

53. Ensemble cryoEM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme

: Zhang, Zhening; Liang, Wenguang G.; Bailey, Lucas J.; Tan, Yong Zi; Wei, Hui; Wang, Andrew; Farcasanu, Mara; Woods, Virgil A.; McCord, Lauren A.; Lee, David; Shang, Weifeng; Deprez-Poulain, Rebecca; Deprez, Benoit; Liu, David R.; Koide, Akiko; Koide, Shohei; Kossiakoff, Anthony A.; Li, Sheng; Carragher, Bridget; Potter, Clinton; Tang, Wei-Jen
: 2018
: Articles
: Molecular biologyInsulinPeptidesProteolytic enzymesBiophysics

54. ERK Phosphorylates p66shcA on Ser36 and Subsequently Regulates p27^kip1 Expression via the Akt-FOXO3a Pathway: Implication of p27^kip1 in Cell Response to Oxidative Stress

: Hu, Yuanyu; Wang, Xueying; Zeng, Li; Cai, De-Yu; Sabapathy, Kanaga; Goff, Stephen P.; Firpo, Eduardo J.; Li, Baojie
: 2005
: Articles
: Molecular biologyCytology

55. Estimation of the 3D Variance-Covariance Map in Cryo-Electron Microscopy

: Liao, Hstau Y.; Hashem, Yaser; Frank, Joachim
: 2010
: Articles
: Molecular biology

56. Expression of enzymatically active reverse transcriptase in Escherichia coli

: Tanese, Naoko; Roth, Monica; Goff, Stephen P.
: 1985
: Articles
: Genetic transcription--ResearchMouse leukemia virusesCatalytic RNAMolecular biologyBiochemistry

57. ExpressionPlot: a web-based framework for analysis of RNA-Seq and microarray gene expression data

: Friedman, Brad; Maniatis, Tom
: 2011
: Articles
: StatisticsBioinformatics

58. From DNA to proteins via the ribosome: Structural insights into the workings of the translation machinery

: Frank, Joachim; Agirrezabala, Xabier
: 2010
: Articles
: GeneticsMolecular biology

59. Genetic analysis of novel regulators of neuronal migration in Caenorhabditis elegans: the insulin/IGF-1 signaling pathway, a chromatin-binding factor ZFP-1 (AF10) and endogenous RNAi

: Kennedy, Lisa Michelle
: 2013
: Theses
: Genetics

60. Genetic and Functional Modularity of Hox Activities in the Specification of Limb-Innervating Motor Neurons

: Lacombe, Julie; Hanley, Olivia; Jung, Heekyung; Philippidou, Polyxeni; Surmeli, Gulsen; Dasen, Jeremy S.; Grinstein, Jonathan
: 2013
: Articles
: Motor neuronsNeuronsNeural circuitryNeurogeneticsHomeobox genesGenetics

61. Graph complexity analysis identifies an ETV5 tumor-specific network in human and murine low-grade glioma

: Pan, Yuan; Duron, Christina; Bush, Erin C.; Ma, Yu; Sims, Peter A.; Gutmann, David H.; Radunskaya, Ami; Hardin, Johanna
: 2018
: Articles
: GliomasGene regulatory networksGene expressionSystem analysisSystems biologyMathematics

62. Homology-based inference sets the bar high for protein function prediction

: Rost, Burkhard; Roos, Manfred; Mahlich, Yannick; Landerer, Cedric; Krompass, Denis; Kiening, Michael; Kaufman, Stefanie; Hönigschmid, Peter; Hopf, Thomas A.; Hamp, Tobias; Kassner, Rebecca; Seemayer, Sefan; Vicedo, Esmeralda; Schaefer, Christian; Achten, Dominik; Auer, Florian; Boehm, Ariane; Braun, Tatjana; Hecht, Maximilian; Heron, Mark
: 2013
: Articles
: Bioinformatics

63. Host Cell Factors in HIV Replication: Meta-Analysis of Genome-Wide Studies

: Bushman, Frederic D.; Fernandes, Jason; D'Orso, Ivan; Malani, Nirav; Zhou, Honglin; Hazuda, Daria J.; Espeseth, Amy S.; Konig, Renate; Bandyopadhyay, Sourav; Ideker, Trey; Cagney, Gerard; Diamond, Tracy L.; Goff, Stephen P.; Krogan, Nevan J.; Frankel, Alan D.; Young, John A. T.; Chanda, Sumit K.
: 2009
: Articles
: PathologyGeneticsCytology

64. Host Proteins Interacting with the Moloney Murine Leukemia Virus Integrase: Multiple Transcriptional Regulators and Chromatin Binding Factors

: Studamire, Barbara; Goff, Stephen P.
: 2008
: Articles
: VirologyOncologyBiochemistry

65. Identifying candidate drivers of alcohol dependence-induced excessive drinking by assembly and interrogation of brain-specific regulatory networks

: Repunte-Canonigo, Vez; Shin, William Kihoon; Vendruscolo, Leandro F.; Lefebvre, Celine; van der Stap, Lena; Kawamura, Tomoya; Schlosburg, Joel E.; Alvarez, Mariano Javier; Koob, George F.; Califano, Andrea; Sanno, Pietro Paolo
: 2015
: Articles
: Gene regulatory networksAlcoholismBiology--Classification

66. Integration of EGFR and LIN-12/Notch signaling in Vulval Precursor Cell fate specification in Caenorhabditis elegans

: Underwood, Ryan
: 2018
: Theses
: BiochemistryMetazoaCell interactionCellular signal transductionBiophysics

67. Interactions of Host Proteins with the Murine Leukemia Virus Integrase

: Studamire, Barbara; Goff, Stephen P.
: 2010
: Articles
: PathologyMolecular biologyBiochemistry

68. Isolation of Suppressor Genes that Restore Retrovirus Susceptibility to a Virus-resistant Cell Line

: Gao, Guangxia; Goff, Stephen P.
: 2004
: Articles
: CytologyGeneticsVirology

69. Kinematic Responses to Changes in Walking Orientation and Gravitational Load in Drosophila melanogaster

: Mendes, Cesar; Rajendren, Soumya V.; Bartos, Imre; Marka, Szabolcs; Mann, Richard S.
: 2014
: Articles
: WalkingInsects--LocomotionDrosophila melanogasterEntomologyNeurosciencesKinesiology

70. Large-scale experimental studies show unexpected amino acid effects on protein expression and solubility in vivo in E. coli

: Hunt, John F.; Tong, Saichiu; Bracic, Ana; Luff, Jon; Naumov, Victor; Acton, Thomas; Manor, Philip; Xiao, Rong; Rost, Burkhard; Montelione, Gaetano; Everett, John; Price, W. Nicholson; Handelman, Samuel
: 2011
: Articles
: Molecular biologyBiochemistry

71. Learning from cadherin structures and sequences: affinity determinants and protein architecture

: Felsovalyi, Klara
: 2014
: Theses
: Protein bindingCadherinsBiochemistryBioinformaticsBiophysics

72. Linker insertion mutagenesis of the human immunodeficiency virus reverse transcriptase expressed in bacteria: definition of the minimal polymerase domain

: Prasad, Vinayaka R.; Goff, Stephen P.
: 1989
: Articles
: Insertional mutagenesisHIV (Viruses)--TreatmentVirologyMolecular biologyDNA polymerases

73. Mechanics of Gram-positive bacterial cell adhesion

: Echelman, Daniel Jay
: 2018
: Theses
: BiophysicsNanoscienceMicrobiologyCell adhesion--Molecular aspectsGram-positive bacteriaCells--Mechanical properties

74. Mechanism of calmodulin inactivation of the calcium-selective TRP channel TRPV6

: Singh, Appu K.; McGoldrick, Luke Lawrence Reedy; Twomey, Edward Charles; Sobolevsky, Alexander I.; Columbia University. Cellular, Molecular and Biomedical Studies
: 2018
: Articles
: CalmodulinTRP channelsMolecular biologyIon channels

75. Mechanisms for Taste Sensation of Carbonation

: Yarmolinsky, David
: 2014
: Theses
: BiologyNeurosciences

76. Mechanochemical Methods for Single Molecule Biochemistry and Studies of Thiol-Disulfide Exchange in Proteins

: Kosuri, Pallav
: 2012
: Theses
: BiophysicsBiochemistryBiology

77. Membrane Interaction of Bound Ligands Contributes to the Negative Binding Cooperativity of the EGF Receptor

: Arkhipov, Anton; Shan, Yibing; Kim, Eric T.; Shaw, David Elliot
: 2014
: Articles
: Cell membranesCrystals--StructureDimersBiochemistry

78. Membrane potential and Ca2+ concentration dependence on pressure and vasoactive agents in arterial smooth muscle: A model

: Karlin, Arthur
: 2015
: Articles
: Molecular biologyBiochemistryPhysiology

79. Molecular basis of sidekick-mediated cell-cell adhesion and specificity

: Goodman, Kerry; Yamagata, Masahito; Jin, Xiangshu; Mannepalli, Seetha M.; Katsamba, Phinikoula S.; Ahlsen, Goran; Sergeeva, Alina P.; Honig, Barry; Sanes, Joshua R.; Shapiro, Lawrence S.
: 2016
: Articles
: NeurosciencesCell interactionCell adhesionMolecular biology

80. Molecular Evolution and Genetic Analysis of the Major Capsid Protein VP1 of Duck Hepatitis A Viruses: Implications for Antigenic Stability

: Ma, Xiuli; Sheng, Zizhang; Huang, Bing; Qi, Lihong; Li, Yufeng; Yu, Kexiang; Liu, Cunxia; Qin, Zhuoming; Wang, Dan; Song, Minxun; Li, Feng
: 2015
: Articles
: Ducks--MortalityViruses--EvolutionEvolutionary geneticsImmune serumsHepatitis A virusEvolution (Biology)GeneticsAnimals--Diseases

81. Molecular Mechanisms Controlling Synaptic Vesicle Fusion

: Radoff, Daniel Todd
: 2011
: Theses
: BiochemistrySynaptic vesiclesCell membranesMembrane proteins

82. Nanoscale Electrical and Coarse-grained Molecular Dynamics Studies of Influenza Hemagglutinin-mediated Membrane Fusion Pores

: Alcott, Brett Eugene
: 2017
: Theses
: BiophysicsBiochemistryVirologyMolecular dynamicsMembrane fusion

83. Nuclear matrix protein Matrin 3 is a regulator of ZAP-mediated retroviral restriction

: Erazo, Angela; Goff, Stephen P.
: 2015
: Articles
: Gene expressionNuclear matrixRetrovirusesAntiretroviral agentsMolecular biologyBiochemistry

84. Orientations and Proximities of the Extracellular Ends of Transmembrane Helices S0 and S4 in Open and Closed BK Potassium Channels

: Niu, Xiaowei; Liu, Guoxia; Wu, Roland; Chudasama, Neelesh; Zakharov, Sergey; Karlin, Arthur; Marx, Steven O.
: 2013
: Articles
: BiochemistryMolecular biologyBiophysicsMedicine

85. Overexpression of Fasciculation and Elongation Protein ζ-1 (FEZ1) Induces a Post-entry Block to Retroviruses in Cultured Cells

: Naghavi, Mojgan H.; Hatziioannou, Theodora; Gao, Guangxia; Goff, Stephen P.
: 2005
: Articles
: Molecular biologyVirologyGenetics

86. Oxidative Folding in Bacteria: Studies Using Single Molecule Force Spectroscopy

: Kahn, Thomas
: 2016
: Theses
: Protein foldingOxidoreductasesEscherichia coli--PhysiologyOxidationBiophysicsBiochemistry

87. PLATE-Seq: An Efficient and Scalable Method for Using RNA-Seq as a Primary Output in High Throughput Drug Screens

: Ray, Forest
: 2016
: Theses
: Drugs--EffectivenessHigh throughput screening (Drug development)Gene expression--Research--MethodologyBiology

88. Players in the silencing of retroviral DNAs in embryonic stem cells

: Schlesinger, Sharon; Wang, Gary Zhe; Lee, Andreia H.; Goff, Stephen P.
: 2013
: Presentations (Communicative Events)
: Retrovirus infectionsGene silencingEmbryonic stem cellsVirologyMolecular biology

89. Potent and reversible lentiviral vector restriction in murine induced pluripotent stem cells

: Geis, Franziska K.; Galla, Melanie; Hofmann, Dirk; Kuehle, Johannes; Zychlinski, Daniela; Maetzig, Tobias; Schott, Juliane W.; Schwarzer, Adrian; Gofnet, Christine; Goff, Stephen P.; Schambach, Axel
: 2017
: Articles
: LentivirusesStem cellsPeptidylprolyl isomeraseRetroviruses

90. Precise temporal regulation of alternative splicing during neural development

: Weyn-Vanhentenryck, Sabastien Matthieu; Feng, Huijuan; Ustianenko, Dmytro; Duffié, Rachel; Yan, Qinghong; Jacko, Martin; Martinez, Jose C.; Goodwin, Marianne; Zhang, Xuegong; Hengst, Ulrich; Lomvardas, Stavros; Swanson, Maurice S.; Zhang, Chaolin
: 2018
: Articles
: Genetic regulationNeurologyRNA splicing

91. Prediction of enzyme function based on 3D templates of evolutionarily important amino acids

: Kristensen, David; Ward, R Matthew; Lisewski, Andreas; Erdin, Serkan; Chen, Brian Y; Fofanov, Viacheslav; Kimmel, Marek; Kavraki, Lydia; Lichtarge, Olivier
: 2008
: Articles
: GenomicsProteins--StructureBiophysicsMolecular biology

92. PrePPI: a structure-informed database of protein–protein interactions

: Zhang, Qiangfeng Cliff; Petrey, Donald S.; Garzon Canas, Jose I.; Deng, Lei; Honig, Barry
: 2012
: Articles
: BiochemistryMolecular biologyBiomedical engineering

93. Proviral Silencing in Embryonic Cells is Regulated by Yin Yang 1

: Schlesinger, Sharon; Lee, Andreia H.; Wang, Gary Zhe; Green, Lisa; Goff, Stephen P.
: 2013
: Articles
: CytologyVirologyGenetics

94. Quantification of gait parameters in freely walking wild type and sensory deprived Drosophila melanogaster

: Mendes, Cesar; Bartos, Imre; Akay, Turgay; Marka, Szabolcs; Mann, Richard S.
: 2013
: Articles
: BiochemistryBiophysicsNeurosciences

95. Quantitative Analysis of the DNA Methylation Sensitivity of Transcription Factor Complexes

: Kribelbauer, Judith F.; Laptenko, Oleg; Chen, Siying; Martini, Gabriella D.; Freed-Pastor, William Allen; Prives, Carol L.; Mann, Richard S.; Bussemaker, Harmen J.
: 2017
: Articles
: DNA--MethylationTranscription factorsGenetic regulationDNA-protein interactionsEpigenetics

96. Quelling targets the rDNA locus and functions in rDNA copy number control

: Cecere, Germano; Cogoni, Carlo
: 2009
: Articles
: MicrobiologyMolecular biology

97. Regulation of Release Factor 2 in Non-canonical Translation Pathways

: Huang, Bridget Yih Jiin
: 2017
: Theses
: Bacterial proteinsRibosomesBiochemistryProteins--SynthesisBiophysics

98. Regulation of Transcription Elongation and Termination

: Washburn, Robert; Gottesman, Max E.
: 2015
: Articles
: Genetic transcriptionBiomoleculesBiomolecules--StructureMicrobiology

99. Restriction of HIV-1-based lentiviral vectors in adult primary marrow-derived and peripheral mobilized human CD34+ hematopoietic stem and progenitor cells occurs prior to viral DNA integration

: Griffin, Daniel; Goff, Stephen P.
: 2016
: Articles
: Gene therapyLentivirusesStem cellsHIV infectionsMolecular biology

100. RNA force field with accuracy comparable to state-of-the-art protein force fields

: Tan, Dazhi; Piana, Stefano; Dirks, Robert M.; Shaw, David Elliot
: 2018
: Articles
: BiochemistryBiophysicsRNA-protein interactionsMolecular dynamicsNucleic acids

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