1. A Novel Analytical Framework for Regulatory Network Analysis of Single-Cell Transcriptomic Data Vlahos, Lukas 2023 Theses Cells--AnalysisOncologyNucleotide sequenceAdenocarcinomaPancreas--CancerMammals--Cytology
2. Evolutionary rate determinants and functional optimization of proteins Usmanova, Dinara R. 2023 Theses Evolution (Biology)Molecular biologyGeneticsProteins
3. Identifying and Targeting Master Regulators of Drug Resistance in Lung Adenocarcinoma through Network Analysis of Tumor Transcriptomic Data Griffin, Aaron Timothy 2023 Theses BioinformaticsBiology--ClassificationStatisticsBiochemical markersLungs--CancerAdenocarcinomaDrug resistance in cancer cellsMachine learning--Industrial applicationsAmerican Society of Clinical OncologyMemorial Sloan-Kettering Cancer Center
4. Identifying Critical Regulatory Elements of Alternative Splicing Recinos, Yocelyn 2023 Theses BiologyMolecular biologyGenetic engineeringRNA splicingExons (Genetics)Mammals--Genetics
5. Investigating the determinants of resistance to quinine and chloroquine using a novel Plasmodium falciparum genetic cross Kanai, Mariko 2023 Theses MicrobiologyGeneticsMolecular biologyPlasmodium falciparumQuinine--Therapeutic useMalaria--TreatmentDrug resistance
6. NMR Studies of the GCN4 Transcription Factor and Hox DNA Consensus Sequences Crawley, Timothy 2023 Theses BiophysicsMolecular biologyDNABootstrap (Statistics)Nuclear magnetic resonance spectroscopyDNA-binding proteins
7. Noninvasive, low-cost RNA-sequencing enhances discovery potential of transcriptome studies Martorella, Molly 2023 Theses GeneticsRNAHair folliclesGene expression--Research--MethodologyUrineNucleotide sequence
8. Prediction of Human Gut Bacterial Secreted Proteins and their Interactions with Human Colonic Proteins Velez-Cortes, Florencia 2023 Theses BioinformaticsIntestines--MicrobiologyDigestive organs--BacteriologyBacteriology
9. The itaconate-driven immunometabolic response to S. aureus promotes persistent lung infection Tomlinson, Kira Leigh 2023 Theses MicrobiologyImmunologyBioinformaticsStaphylococcus aureus infectionsBiofilmsGlycolysisPneumoniaNeutrophils--Immunology
10. The Major Histocompatibility Complex Class I in the Pathogenesis of B-Cell Lymphomas Gomez, Karen 2023 Theses BiologyCarcinogenesisLymphomasHistocompatibilityEpstein-Barr virusCancer--Immunological aspects
11. The unfolded protein response couples neuronal identity to circuit formation in the developing mouse olfactory system Shayya, Hani 2023 Theses NeurosciencesDevelopmental biologyMice--GeneticsMice--DevelopmentOlfactory receptorsAxonsNeural circuitry
12. Using toxin-producing bacteria to treat explants and autochthonous mouse models of pancreatic cancer Decker, Amanda R. 2023 Theses OncologyBiomedical engineeringMicrobiologyPancreas--CancerCancer--TreatmentBacteriologyMice--DiseasesCancer--Immunotherapy
13. A Novel Human Multi-Tissue System For Preclinical Drug Evaluation And Recapitulation Of Metastasis Chramiec, Alan 2022 Theses Biomedical engineeringOncologyCancer--ChemotherapyTumorsTissue engineeringDrugs--Testing
14. ARP2/3- and resection-coupled genome reorganization into repair domains facilitates chromosome translocations Zagelbaum, Jennifer 2022 Theses BiologyGenomesDNA repairChromosomesPolymerizationChromatinTranslocation (Genetics)
15. Autophagy and Hematopoietic Stem Cell Potential During Aging Dellorusso, Paul Vincent 2022 Theses BiologyGeneticsImmunologyAutophagic vacuolesHematopoietic stem cells--Therapeutic useCells--AgingGlucose--Metabolism
16. Carabin Is a Negative Regulator of Cd8+ T-cell-mediated Anti-tumor Immunity Cohen, Adrienne 2022 Theses OncologyImmunologyT cells--Therapeutic useT cells--ResearchCarcinogenesisTumor markersSquamous cell carcinomaBreast--CancerMelanoma--Immunological aspectsCancer--Immunological aspects
17. Characterization of pathogenic BicD2 mutations in vitro and in vivo. Yi, Julie Young Joo 2022 Theses CytologyMolecular biologyNeurosciencesMicrotubulesEukaryotic cellsDyneinMutagenesisKinesin
18. Design and Application of Cationic Nanocarriers to Inhibit Chemotherapy-Induced Breast Cancer Metastasis and Inflammation Akinade, Tolulope 2022 Theses Biomedical engineeringCytologyMedicineCancer--Chemotherapy--ResearchBreast--Cancer--TreatmentBreast--Cancer--ChemotherapyDoxorubicin--Therapeutic usePaclitaxel--Therapeutic useNanoparticlesMice as laboratory animalsCytokinesMetastasis
19. Discovering Master Regulators of Single-Cell Transcriptional States in the Tumor Immune Microenvironment to Reveal Immuno-Therapeutic Targets and Synergistic Treatments Obradovic, Aleksandar 2022 Theses OncologyImmunologyCancer--ImmunotherapyRenal cell carcinomaT cells--Therapeutic useSquamous cell carcinomaBile ducts--CancerProstate--Cancer--Treatment
20. Lipids on Fire: Identifying and Targeting Subcellular Membranes that Drive Ferroptosis Von Krusenstiern, Alfred Nikolai 2022 Theses BiochemistryCell deathLipids--PeroxidationCancer--TreatmentEndoplasmic reticulumFatty acidsRaman effectConfocal fluorescence microscopy