1. Zc3h13: A Master Regulator of Epitranscriptomic Landscape during Early Development Chirathivat, Napon 2021 Theses Developmental biologyStem cells--ResearchMiceBlastocystTrophoblastGenetic regulation
2. Watching the Replisome: Single-molecule Studies of Eukaryotic DNA Replication Duzdevich, Daniel 2017 Theses DNA replicationMolecular biologyCytologyEukaryotic cells--GeneticsBiologyBiophysics
3. Visualizing the One-Dimensional Diffusion of DNA Mismatch Repair Proteins at the Single-Molecule Level Gorman, Jason 2011 Theses BiologyBiochemistryBiophysicsDNA repairEukaryotic cells--Genetics
4. viSNE and Wanderlust, two algorithms for the visualization and analysis of high-dimensional single-cell data Amir, El-ad David 2014 Theses ImmunologyBioinformatics
5. Using Genomic Transgenes and the CRISPR/Cas9 Gene Editing System to Understand How Hedgehog Signaling Regulates Costal2 and Cubitus Interruptus in Drosophila melanogaster Little, Jamie 2017 Theses BiologyHedgehog proteinsMolecular biologyGenes
6. Unraveling the link between the Mdm2-p53 axis and aging Wu, Danyi 2017 Theses BiologyMolecular biologyAgingp53 protein
7. Understanding the nervous system as an information processing machine: dense, nonspecific, canonical microcircuit architecture of inhibition in neocortex . . . Packer, Adam Max 2011 Theses NeurosciencesNervous systemInterneuronsMarr, David, 1945-1980
8. Understanding Chemotaxis in the Nematode Caenorhabditis elegans: From Molecules to Behavior Smith, Heidi 2013 Theses GeneticsNeurosciencesPsychology
9. Understanding and Engineering Multicomponent Living Systems: Examples from Synthetic Genomics and Engineered Living Materials McBee, Andrew Ross MacKay 2022 Theses BiologySynthetic biologyGenomicsMetazoaAmino acidsValineMycelium
10. Understand Biology Using Single Cell RNA-Sequencing Ding, Hongxu 2018 Theses BiologyNucleotide sequenceSystems biology
11. Trans-Acting Factors Affecting Retroviral Recoding Green, Lisa Christine 2012 Theses VirologyMolecular biology
12. Topographical Projections of Limb-Innervating Motor Neurons in Drosophila melanogaster Specified by Morphological Transcription Factors and Downstream Cell Surface Proteins Venkatasubramanian, Lalanti 2019 Theses MorphologyNeurosciencesMotor neuronsDrosophila melanogasterTranscription factors
13. The roles of Threonine-4 and Tyrosine-1 of the RNA Polymerase II C-Terminal Domain: New insights into transcription from Saccharomyces cerevisiae Yurko, Nathan Michael 2017 Theses BiologyRNA polymerasesGenetic transcriptionSaccharomyces cerevisiae
14. The Roles of Splicing and H2A.Z in Chromatin Assembly Kallgren, Scott 2014 Theses Gene silencingCell differentiationRNA intereferenceChromatinMolecular biology
15. The Roles and Regulation of the Redundant Phenazine Biosynthetic Operons in Pseudomonas aeruginosa PA14 Recinos, David Alfonso 2012 Theses Microbiology
16. The Role of the Tail of the Striatum in Associative Learning Stanley, Adrien Trejo 2023 Theses NeurosciencesPaired-association learningMiceBasal gangliaSerotoninNoradrenaline
17. The Role of Mga in the Survival of Pluripotent Cells During Peri-implantation Development Washkowitz, Andrew 2013 Theses GeneticsMolecular biology
18. The Role of Kinesins in Cell Fate Determination During Neurogenesis Helmer, Paige 2023 Theses BiologyKinesinNeurogeneticsNeuronsBrain--PhysiologyMammals--Nervous systemNeuroglia
19. The role of Distal antenna in the regulation of D. melanogaster neural stem cell competence Benchorin, Gillie 2022 Theses Developmental biologyNeurosciencesCytologyDrosophila melanogasterDrosophila melanogaster--PhysiologyGenomesDNA-binding proteinsNuclear proteinsAntennae (Biology)
20. The Role of Costal2 and its Collaborators in Regulation of Ci Processing and in Mediation of Response to Hedgehog in Drosophila Zadorozny, Eva Vladi 2014 Theses Genetics
21. The relationship between intracellular forces and cellular stiffness investigated by atomic force microscopy Mandriota, Nicola 2016 Theses Cells--Mechanical propertiesCellsBiomechanicsNanotechnologyBiophysics
22. The Regulation of PREX2 by Phosphorylation Barrows, Douglas Walker 2015 Theses PhosphorylationInsulin--Mechanism of actionPhosphoinositidesBiologyBiochemistryPharmacology
23. The Physical State of Water in Dormant Bacteria DeLay, Michael 2018 Theses BiophysicsBacteriaBacterial sporesWaterBiology
24. The Neural Basis of Sugar and Fat Cravings Tan, Hwei-Ee 2020 Theses NeurosciencesBiologySugarGlucoseFatAppetite
25. The Mre11-Rad50-Xrs2 Complex in the DNA Damage Response Oh, Julyun 2018 Theses BiologyGeneticsMolecular biologyDNA damageDNA repair
26. The Molecular Mechanism of the Escherichia Coli vitamin B12 Transporter BtuCD-F: Real-time Observation of the Transporter in Motion Kim, Jinrang 2012 Theses ATP-binding cassette transportersBiological transportEscherichia coliBiophysics
27. The Molecular Mechanism of Replication Independent Repair of DNA Interstrand Crosslinks Kato, Niyo 2018 Theses BiologyGeneticsDNA repairCrosslinking (Polymerization)Molecular biology
28. The generation and phenotypic effect of human genetic mutations Chen, Chen 2018 Theses BioinformaticsComputer scienceMutation (Biology)Human genetics--VariationMachine learning
29. The functions of the RNA polymerase II CTD in transcription and RNA processing Hsin, Jing-Ping 2013 Theses Molecular biologyCytology
30. The Endoplasmic Spreading Mechanism of Fibroblasts: Showcasing the Integrated Cytoskeleton Lynch, Christopher D. 2012 Theses CytologyBiophysicsMolecular biology
31. The Development of an Inducible Akt as a Potential Gene Therapy for Parkinson’s Disease Park, Soyeon 2017 Theses BiologyNeurosciencesParkinson's diseaseGene therapyProtein kinases
32. The Catalytic Efficiency and Conformational Dynamics of Escherichia coli DNA Repair Enzyme AlkB Ergel, Burce 2012 Theses BiochemistryBiophysicsOxidoreductasesCatalysisProteins
33. Temporal control of vulval precursor cell fate patterning in Caenorhabditis elegans Li, Ji 2011 Theses Developmental biologyGeneticsCaenorhabditis elegans--GeneticsVulva
34. Targeting Histone Modifications in Isocitrate Dehydrogenase-1 R132H Mutated Glioma and Oligodendrocyte Progenitor Cells Sprinzen, Lisa Michelle 2021 Theses OncologyMiceGliomasStem cellsMutation (Biology)
35. Systems Genetics of DNA Damage Tolerance – Cisplatin, RAD5 & CRISPR-mediated Nonsense Bryant, Eric Edward 2019 Theses GeneticsBioinformaticsBiology--ClassificationDNA damageCisplatinCRISPR (Genetics)
36. Systems Biology Approaches to The Study of Neurological Disorders and Somatic Cell Reprogramming Shin, William Kihoon 2016 Theses Cell hybridizationCentral nervous system--DiseasesNervous system--DegenerationGenetic transcriptionBioinformaticsNeurosciencesBiology--Classification
37. Systematic elucidation of transcriptional network necessary for initiation and maintenance of high-risk neuroblastoma Rajbhandari, Presha 2016 Theses Genetic regulationCarcinogenesisNeuroblastoma--Genetic aspectsOncology
38. Synaptic Elasticity Yang, Ju 2018 Theses BiophysicsNeurosciencesNanotechnologySynapsesNeuroplasticityElasticity
39. Study of Short Forms of P/Q-Type Voltage-Gated Calcium Channels Feng, Qiao 2017 Theses Central nervous systemNeurotransmittersBrain--DiseasesCalcium channelsBiology
40. Studies on the mechanisms that contribute to the endoplasmic reticulum quality control system in Saccharomyces cerevisiae Dorrington Quinones, Mariana 2011 Theses Molecular biologySaccharomyces cerevisiaeEndoplasmic reticulumProtein foldingProteins--Synthesis
41. Studies on RNA Regulation: From Enhancer RNAs to RBBP6 Isoform3 Chen, Yaqiong 2019 Theses Molecular biologyRNAGenetic regulationBiology
42. Studies on mammalian pre-mRNA splicing : connections to transcription and cancer David, Charles J. 2011 Theses BiochemistryMolecular biologyRNA splicingCancer--Genetic aspectsCancer cellsMammals--GeneticsGlycolysis
43. Studies of SV40-transformation and the Loss of Growth Factor Requirements Powers, Robert Scott 2013 Theses Biology
44. Studies of Caenorhabditis elegans neuronal cell fate Tekieli, Tessa 2022 Theses NeurobiologyCaenorhabditis elegansCaenorhabditis elegans--GeneticsNervous systemDopaminergic neuronsHomeobox genes
45. Structure Characterization of the 70S-BipA Complex Using Novel Methods of Single-Particle Cryo-Electron Microscopy Ho, Danny Nam 2014 Theses Bacterial proteinsElectron microscopyAntibacterial agentsCryoelectronicsBiologyBiophysics
46. Structural studies of the yeast transcription termination complex Nrd1-Nab3-Sen1 Zhang, Yinglu 2019 Theses BiologyMolecular biologyBiochemistryRNA polymerasesGenetic transcription
47. Structural Studies of the Integrator Complex -- pre-UsnRNA 3'-end Processing Machinery Wu, Yixuan 2018 Theses BiologyBiochemistryCatalytic RNA
48. Structural Studies of the Fungal pre-mRNA 3'-end Processing Machinery Jurado, Ashley Rae 2015 Theses ProteinsRNA splicingScission (Chemistry)Messenger RNAMolecular biologyBiologyBiochemistry
49. Structural Studies of NediV-IRES-Mediated Translation Initiation Altomare, Clara Gilda 2021 Theses BiologyVirusesRNA virusesRibosomesEukaryotic cellsGenetic translation
50. Structural Studies of E. coli FtsZ Filaments McCoy, Kelsey 2021 Theses BiophysicsMicrobiologyCytoskeletal proteinsEscherichia coliStaphylococcus aureus
51. Structural and functional studies on the regulation of pyruvate carboxylase by the bacterial second messenger cyclic-di-AMP Choi, Philip H. 2017 Theses Enzymes--StructureListeria monocytogenesEnzymesPyruvate carboxylaseBiochemistryMicrobiology
52. Structural and Functional Studies of TRPML1 and TRPP2 Benvin, Nicole Marie 2017 Theses BiologyBiochemistryBiophysicsTRP channelsProteins--Structure
53. Structural and Functional Studies of Biotin-Dependent Carboxylases Huang, Christine S. 2013 Theses BiochemistryBiophysics
54. Structural and Biochemical Studies of the Human pre-mRNA 3’-end Processing Complex Hamilton, Keith 2021 Theses BiochemistryBiophysicsMessenger RNA--AnalysisMutagenesis
55. Structural and Biochemical Characterizations of the Symplekin-Ssu72-CTD Complex in Pre-mRNA 3' end Processing Xiang, Kehui 2013 Theses BiochemistryGenetic transcriptionRNA polymerasesBiologyMolecular biology
56. Spatial, temporal and mechanistic characterization of apoptotic death in the developing subventricular zone Marcolino, Bianca 2013 Theses CytologyCell deathDevelopmental neurobiologyApoptosisNeurosciencesBiology
57. Spatially restricted regulation of cell competition by the cytokine Spaetzle Alpar, Elif Lale 2018 Theses BiologyGeneticsCytokinesCells--Growth--Regulation
58. Spatially resolved molecular dysfunction in the prefrontal cortex of patients with amyotrophic lateral sclerosis (ALS) Petrescu, Joana 2023 Theses NeurosciencesAmyotrophic lateral sclerosisNervous system--DiseasesFrontotemporal dementiaPrefrontal cortex
59. Single-particle cryo-electron microscopy studies of ribosomes with fragmented 28S rRNA Gutierrez-Vargas, Cristina 2020 Theses BiologyStructural bioinformaticsRibosomes--StructureRNATrypanosoma cruziFragmentation reactions
60. Shared Molecular Features of Inherited and Sporadic ALS/FTD Conlon, Erin Grace 2018 Theses BiochemistryGeneticsNeurosciencesAmyotrophic lateral sclerosisFrontotemporal dementiaMolecular biology
61. Sexually Dimorphic Development of the Caenorhabditis elegans Nervous System Bayer, Emily Ann 2020 Theses BiologyCaenorhabditis elegansSexual dimorphism (Animals)Genetic sex determinationTranscription factorsNervous system
62. Serum Regulation of Inhibitor of DNA Binding/Differentiation 1 Expression by a BMP Pathway and BMP Responsive El Lewis, Thera Cathy 2013 Theses BiologyMolecular biology
63. Screening Whole-Genome Sequenced Strains to Investigate Genetic Determinants of Gentle Touch Sensitivity in Caenorhabditis elegans Lawry, Stephanie Terese 2020 Theses GeneticsBiologyGenomicsGenomesNematodesTouchNeurosciences
64. Roles for Cytoplasmic Dynein and the Unconventional Kinesin, KIF1a, during Cortical Development Hu, Daniel Jun-Kit 2015 Theses CytologyNeurosciences
65. Role of Mu-Opioid Receptors in the Behavioral Effects of the Antidepressant Tianeptine Han, Jaena 2021 Theses BiologyNeurosciencesDepression, Mental--TreatmentAntidepressantsSerotonin uptake inhibitorsMice
67. Role of Kinesins in Cytoplasmic Exploration by Adenovirus Zhou, Jie 2017 Theses CytoplasmAdenovirusesMicrotubulesDyneinCytologyKinesinVirology
68. Retroviral Replication and Restriction Buckmaster, Marlene Vreni 2021 Theses VirologyImmunologyMicrobiologyHIV (Viruses)Retroviruses--GeneticsSimian viruses
69. Re-thinking the role of ribosomal proteins in the Mdm2-p53 axis Daftuar, Lilyn 2013 Theses Molecular biology
70. Regulatory Logic of Pan-neuronal Gene Expression in Caenorhabditis elegans Stefanakis, Nikolaos 2015 Theses BiologyGenetics
71. Regulation of the LIN-12/Notch Core Nuclear Complex Components in Caenorhabditis elegans Reproductive Development Luo, Katherine Leisan 2020 Theses Developmental biologyCaenorhabditis elegans--GeneticsVulvaGenerative organsLigand binding (Biochemistry)
72. Regulation Of Retroviral Silencing In Different Cell Types Wang, Cheng 2015 Theses RetrovirusesCellsMouse leukemia virusesBiochemistryVirology
73. Regulation of Proviral Expression and Post-Translational Modifications in Embryonic Cells Lee, Andreia H. 2017 Theses BiologyVirologyCytologyGenetic regulation
74. Regulation of Parkin Protein Levels by L-3,4-dihydroxyphenylalanine Kovalchuke, Lyudmila 2018 Theses Molecular biologyPathologyNeurosciencesParkinson's diseaseDopa
75. Regulation of Matrix Metallopeptidase-1 in Breast Cancer Metastasis Henckels, Eric Patrick 2013 Theses OncologyMetastasisCarcinogenesisBreast--Cancer
76. Regulation of HLH-2/E2A during Caenorhabditis elegans gonadogenesis Benavidez, Justin M. 2021 Theses Developmental biologyCaenorhabditis elegansHelix-loop-helix motifsSomatic cellsGonads
77. Regulation of heterochromatin formation by the JmjC-domain protein Epe1 Bao, Kehan 2021 Theses BiologyEukaryotic cells--GeneticsHeterochromatinChromatinDNA
78. Regulation of EGFR signal transduction and cell division in quiescent Vulval Precursor Cells during dauer developmental arrest O'Keeffe, Catherine 2023 Theses BiologyDevelopmental biologyCaenorhabditis elegansStem cellsVulvaCell division
79. Regulation of alternative splicing and its connections to cancer Chen, Mo 2011 Theses BiologyMolecular biologyBiochemistryRNA splicingPyruvate kinaseCancer cellsExons (Genetics)Mammals--Genetics
80. Redox-Balancing Strategies in Pseudomonas aeruginosa Lin, Yu-Cheng 2018 Theses MicrobiologyGeneticsPseudomonas aeruginosaBiofilmsOxidation-reduction reaction
81. Redefining the Caenorhabditis elegans DEG/ENaC Mechanosensory Channel Complex Chen, Yushu 2014 Theses NeurosciencesCytologyGenetics
82. Real-time observation of vitamin B12 transport by BtuCD-F at the single-molecule level Zhu, Lingwei 2022 Theses BiophysicsHydrolysisVitamin B12ATP-binding cassette transporters
83. Reading the Disease Leaves: Signals, signatures and synchrony in neurodevelopmental disorders Ressler, Andrew 2021 Theses NeurosciencesGeneticsNervous system--Diseases--Genetic aspectsNeurodevelopmental treatmentTherapeuticsPhenotypeDiseases--Animal modelsToxicity testing--In vitro
84. Ras, p63 and breast cancer Yoh, Kathryn Elizabeth 2016 Theses Breast--CancerCarcinogenesisBreast--Cancer--EtiologyMesenchymeTumor suppressor proteinsOncologyMolecular biology
85. Quantitative trait variation and adaptation in contemporary humans Mostafavi, Hakhamanesh 2019 Theses BiologyGeneticsHuman evolutionGenomes--Data processingHuman genetics--VariationMortality
86. Quantifying spatiotemporal dynamics of human gut microbiota and metabolic limitations of cancer cell growth Ji, Brian 2019 Theses BiologyBiological systemsCancer cells--Growth--RegulationGastrointestinal system--MicrobiologyCell metabolism
87. Proprioceptor subtype identity specified by limb-derived signals Norovich, Amy L. 2017 Theses NeurosciencesMolecular biologyProprioceptorsSensory neurons
88. Prohibitin Homology Domain Proteins in Caenorhabditis elegans Kratz, John Ernest 2010 Theses Molecular biologyMembrane proteinsCaenorhabditis elegans--GeneticsChemotaxisDiacetyl
89. Production and properties of the Pseudomonas aeruginosa R-body virulence factor Wang, Bryan 2022 Theses MicrobiologyPseudomonas aeruginosaAntibiotics--Therapeutic useBiofilms
90. Predicting Autonomous Promoter Activity Based on Genome-wide Modeling of Massively Parallel Reporter Data FitzPatrick, Vincent Drury 2020 Theses BiologyStatisticsPromoters (Genetics)Genomics--Statistical methodsGenetic polymorphisms
91. Positional Coordinates for Spinal Sensory-Motor Connectivity Surmeli, Gulsen 2012 Theses Neurosciences
92. Population Genetics of Mutation Load and Quantitative Traits in Humans Simons, Yuval Benjamin 2019 Theses GeneticsBiologyHuman population geneticsMutation (Biology)
93. Physiology of Pseudomonas Aeruginosa Phenazine Production and Transport Sakhtah, Hassan 2016 Theses PhenazineMetabolitesBiofilmsPseudomonas aeruginosaBiology
94. Phenazine Homeostasis in Pseudomonas aeruginosa Biofilms Bendebury, Anastasia 2018 Theses MicrobiologyElectrical engineeringPhenazinePseudomonas aeruginosaBiofilms
96. On the Role of Sensory Cancellation and Corollary Discharge in Neural Coding and Behavior Enikolopov, Armen 2018 Theses NeurosciencesBiologySensory stimulationCochlear nucleus
97. On certain bacteria from the air of New York City. Dyar, Harrison G. (Harrison Gray), 1866-1929 1895 Theses BacteriaAir--MicrobiologyNineteenth century
98. Nucleolar transcription and its connections to nucleolar homeostasis and mitochondrial stress responses Feng, Shuang 2022 Theses Molecular biologyNucleic acidsHomeostasisMitochondriaCarcinogenesisNervous system--Diseases
99. Novel Regulatory Mechanisms of Cytoplasmic Dynein: A Role for the Complex Base Weil, Sarah J. 2013 Theses BiologyBiochemistry
100. Novel negative regulation of LIN-12/Notch in Caenorhabditis elegans Deng, Yuting 2016 Theses Caenorhabditis elegans--GeneticsGeneticsCaenorhabditis elegans