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1. A sequential Monte Carlo algorithm for inference of subclonal structure in cancer

Ogundijo, Oyetunji Enoch; Zhu, Kaiyi; Wang, Xiaodong; Anastassiou, Dimitris
2019
Articles
Tumors--Growth--Mathematical modelsMonte Carlo methodOncology

2. SeqClone: sequential Monte Carlo based inference of tumor subclones

Ogundijo, Oyetunji E.; Wang, Xiaodong
2019
Articles
Tumors--Genetic aspectsMonte Carlo methodSingle nucleotide polymorphismsBayesian statistical decision theory--Mathematical models

3. A sequential Monte Carlo approach to gene expression deconvolution

Ogundijo, Oyetunji Enoch; Wang, Xiaodong
2017
Articles
Gene expressionMonte Carlo methodElectrical engineering

4. Bayesian estimation of scaled mutation rate under the coalescent: a sequential Monte Carlo approach

Ogundijo, Oyetunji Enoch; Wang, Xiaodong
2017
Articles
BioinformaticsBayesian statistical decision theoryMonte Carlo methodGenealogyGenetics

5. Reverse engineering gene regulatory networks from measurement with missing values

Ogundijo, Oyetunji Enoch; Elmas, Abdulkadir; Wang, Xiaodong
2017
Articles
Missing observations (Statistics)Gene expressionMathematical statisticsGene regulatory networksReverse engineering

6. The folded k-spectrum kernel: A machine learning approach to detecting transcription factor binding sites with gapped nucleotide dependencies

Elmas, Abdulkadir; Wang, Xiaodong; Dresch, Jacqueline M.
2017
Articles
Machine learningNucleotide sequence--Data processingElectrical engineeringComputer science

7. Discovering Genome-Wide Tag SNPs Based on the Mutual Information of the Variants

Elmas, Abdulkadir; Ou Yang, Tai-Hsien; Wang, Xiaodong; Anastassiou, Dimitris
2016
Articles
Genomics--Data processingHuman genetics--Data processingChromosomesGene mappingSingle nucleotide polymorphismsGeneticsBiology--Classification

8. Reconstruction of novel transcription factor regulons through inference of their binding sites

Elmas, Abdulkadir; Wang, Xiaodong; Samoilov, Michael S.
2015
Articles
Comparative genomicsBioinformaticsGenomics--Data processingComputational biologyTranscription factorsElectrical engineeringGeneticsMolecular biologyMathematics

9. User association for energy harvesting relay stations in cellular networks

Wang, Zhe; Wang, Xiaodong; Aldiab, Motasem; Jaber, Tareq
2015
Articles
Wireless communication systemsEnergy harvestingMobile radio stationsRadio relay systemsElectrical engineeringMathematics

10. A sequential Monte Carlo framework for haplotype inference in CNV/SNP genotype data

Iliadis, Alexandros; Anastassiou, Dimitris; Wang, Xiaodong
2014
Articles
Computational biologyGenomics--Data processingBioinformatics