1. Epigenetic Alterations Affecting Transcription Factors and Signaling Pathways in Stromal Cells of Endometriosis Yotova, Iveta; Hsu, Emily; Do, Catherine; Gaba, Aulona; Sczabolcs, Matthias; Dekan, Sabine; Kenner, Lukas; Wenzl, Rene; Tycko, Benjamin 2017 Articles Medical geneticsMethylationEndometriosisGenomics
2. Trans effects of chromosome aneuploidies on DNA methylation patterns in human Down syndrome and mouse models Mendioroz, Maite; Do, Catherine; Jiang, Xiaoling; Liu, Chunhong; Darbary, Huferesh; Lang, Charles F.; Lin, John; Thomas, Anna; Abu-Amero, Sayeda; Stanier, Philip; Temkin, Alexis; Yale, Alexander; Liu, Meng-Min; Li, Yang; Salas, Martha C.; Kerkel, Kristi; Capone, George; Silverman, Wayne; Yu, Y. Eugene; Moore, Gudrun; Wegiel, Jerzy; Tycko, Benjamin 2015 Articles EpigeneticsChromosomesDown syndromeGeneticsBiomechanics
3. Comparative Anatomy of Chromosomal Domains with Imprinted and Non-Imprinted Allele-Specific DNA Methylation Paliwal, Anupam; Temkin, Alexis M.; Kerkel, Kristi; Yale, Alexander; Yotova, Iveta; Drost, Natalia; Lax, Simon; Nhan-Chang, Chia-Ling; Powell, Charles; Borczuk, Alain; Aviv, Abraham; Wapner, Ronald J.; Chen, Xiaowei; Nagy, Peter L.; Schork, Nicholas; Do, Catherine; Torkamani, Ali; Tycko, Benjamin 2013 Articles Anatomy, ComparativeGenomic imprintingDNA--MethylationGeneticsMolecular biology
4. PCDH10 Promoter Hypermethylation is Frequent in most Histologic Subtypes of Mature Lymphoid Malignancies and Occurs Early in Lymphomagenesis Narayan, Gopeshwar; Xie, Dongxu; Freddy, Allen J.; Ishdorj, Ganchimeg; Do, Catherine; Satwani, Prakash; Liyanage, Hema; Clark, Lorraine N.; Kisselev, Sergey; Nandula, Subhadra; Scotto, Luigi; Alobeid, Bachir; Savage, David G.; Tycko, Benjamin; O’Connor, Owen Anthony; Bhagat, Govind; Vundavalli, Murty V. 2013 Articles LymphomasCarcinogenesisPromoters (Genetics)MethylationEpigenetics
5. Stromal Protein Ecm1 Regulates Ureteric Bud Patterning and Branching Paroly, Suneeta S.; Wang, Fengwei; Spraggon, Lee; Merregaert, Joseph; Batourina, Ekatherina; Tycko, Benjamin; Schmidt-Ott, Kai M.; Grimmond, Sean; Little, Melissa; Mendelsohn, Cathy Lee 2013 Articles Uterus--GrowthRetinoids--Physiological effectCytology
6. Altered DNA Methylation in Leukocytes with Trisomy 21 Kerkel, Kristi; Schupf, Nicole; Hatta, Kota; Pang, Deborah I.; Salas, Martha; Kratz, Alexander; Minden, Mark; Vundavalli, Murty V.; Zigman, Warren; Mayeux, Richard Paul; Jenkins, Edmund C.; Torkamani, Ali; Schork, Nicholas J.; Silverman, Wayne; Croy, B. Anne; Tycko, Benjamin 2010 Articles DNA--MethylationT cellsDown syndromeAutoimmune diseasesGenetics
7. Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation Kerkel, Kristi; Spadola, Alexandra; Yuan, Eric; Kosek, Jolanta; Jiang, Le; Hod, Eldad Arie; Li, Kerry; Vundavalli, Murty V.; Schupf, Nicole; Vilain, Eric; Morris, Mitzi; Haghighi, Fatemeh; Tycko, Benjamin 2008 Articles DNA--MethylationGeneticsGenomicsHuman genome
8. Faithful tissue-specific expression of the human chromosome 21-linked COL6A1 gene in BAC-transgenic mice Xing, Luzhou; Salas, Martha; Lin, Chyuan-Sheng; Zigman, Warren; Silverman, Wayne; Subramaniyam, Shivakumar; Vundavalli, Murty V.; Tycko, Benjamin 2007 Articles Gene expressionDown syndromeEndocardial cushion defectsBacterial artificial chromosomes
9. Genomic Profiling Maps Loss of Heterozygosity and Defines the Timing and Stage Dependence of Epigenetic and Genetic Events in Wilms’ Tumors Yuan, Eric; Li, Chi-Ming; Yamashiro, Darrell J.; Kandel, Jessica J.; Thaker, Harshwardhan; Vundavalli, Murty V.; Tycko, Benjamin 2005 Articles GenomicsGeneticsEpigeneticsNephroblastoma
10. Two Somatic Biallelic Lesions Within and Near SMAD4 in a Human Breast Cancer Cell Line Jakob, John; Nagase, Satoru; Gazdar, Adi; Chien, Minchen; Morozova, Irina; Russo, James J.; Nandula, Subhadra; Vundavalli, Murty V.; Li, Chi-Ming; Tycko, Benjamin; Parsons, Ramon E. 2005 Articles Breast--CancerCell linesCytogenetics