Author: Tycko, Benjamin | Search Results | Academic Commons

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1. A pan-cancer analysis of driver gene mutations, DNA methylation and gene expressions reveals that chromatin remodeling is a major mechanism inducing global changes in cancer epigenomes

: Youn, Ahrim; Kim, Kyung In; Rabadan, Raul; Tycko, Benjamin; Shen, Yufeng; Wang, Shuang
: 2018
: Articles
: DNA--MethylationGene expressionCancer--Genetic aspectsTumorsEpigenetics

2. Breast cancer family history and allele-specific DNA methylation in the Legacy Girls Study

: Wu, Hui-Chen; Do, Catherine; Andrulis, Irene L.; John, Esther M.; Daly, Mary; Buys, Saundra; Chung, Wendy K.; Knight, Julia A.; Bradbury, Angela R.; Keegan, Theresa H. M.; Schwartz, Lisa; Krupska, Izabela; Miller, Rachel L.; Santella, Regina M.; Tycko, Benjamin; Terry, Mary Beth
: 2018
: Articles
: EpigeneticsDNA--MethylationBreast--Cancer--Genetic aspectsBreast--Cancer--Environmental aspectsLeucocytes

3. Genetic variants influence on the placenta regulatory landscape

: Delahaye, Fabien; Do, Catherine; Kong, Yu; Ashkar, Remi; Salas, Martha; Tycko, Benjamin; Wapner, Ronald J.; Hughes, Francine
: 2018
: Articles
: PlacentaHuman genetics--VariationGeneticsDNA--Methylation

4. Epigenetic Alterations Affecting Transcription Factors and Signaling Pathways in Stromal Cells of Endometriosis

: Yotova, Iveta; Hsu, Emily; Do, Catherine; Gaba, Aulona; Sczabolcs, Matthias; Dekan, Sabine; Kenner, Lukas; Wenzl, Rene; Tycko, Benjamin
: 2017
: Articles
: Medical geneticsMethylationEndometriosisGenomics

5. Integrative epigenomic and genomic filtering for methylation markers in hepatocellular carcinomas

: Shen, Jing; LeFave, Clare; Sirosh, Iryna; Siegel, Abby B.; Tycko, Benjamin; Santella, Regina M.
: 2015
: Articles
: DNA--MethylationLiver--CancerGenetics

6. Trans effects of chromosome aneuploidies on DNA methylation patterns in human Down syndrome and mouse models

: Mendioroz, Maite; Do, Catherine; Jiang, Xiaoling; Liu, Chunhong; Darbary, Huferesh; Lang, Charles F.; Lin, John; Thomas, Anna; Abu-Amero, Sayeda; Stanier, Philip; Temkin, Alexis; Yale, Alexander; Liu, Meng-Min; Li, Yang; Salas, Martha C.; Kerkel, Kristi; Capone, George; Silverman, Wayne; Yu, Y. Eugene; Moore, Gudrun; Wegiel, Jerzy; Tycko, Benjamin
: 2015
: Articles
: EpigeneticsChromosomesDown syndromeGeneticsBiomechanics

7. Comparative Anatomy of Chromosomal Domains with Imprinted and Non-Imprinted Allele-Specific DNA Methylation

: Paliwal, Anupam; Temkin, Alexis M.; Kerkel, Kristi; Yale, Alexander; Yotova, Iveta; Drost, Natalia; Lax, Simon; Nhan-Chang, Chia-Ling; Powell, Charles; Borczuk, Alain; Aviv, Abraham; Wapner, Ronald J.; Chen, Xiaowei; Nagy, Peter L.; Schork, Nicholas; Do, Catherine; Torkamani, Ali; Tycko, Benjamin
: 2013
: Articles
: Anatomy, ComparativeGenomic imprintingDNA--MethylationGeneticsMolecular biology

8. Creation and characterization of BAC-transgenic mice with physiological over-expression of epitope-tagged RCAN1 (DSCR1)

: Xing, Luzhou; Salas, Martha; Zhang, Hong; Gittler, Julia; Ludwig, Thomas; Lin, Chyuan-Sheng; Vundavalli, Murty V.; Silverman, Wayne; Arancio, Ottavio; Tycko, Benjamin
: 2013
: Articles
: GenomicsGeneticsHuman chromosome 21Down syndrome--Genetic aspectsTransgenic mice

9. PCDH10 Promoter Hypermethylation is Frequent in most Histologic Subtypes of Mature Lymphoid Malignancies and Occurs Early in Lymphomagenesis

: Narayan, Gopeshwar; Xie, Dongxu; Freddy, Allen J.; Ishdorj, Ganchimeg; Do, Catherine; Satwani, Prakash; Liyanage, Hema; Clark, Lorraine N.; Kisselev, Sergey; Nandula, Subhadra; Scotto, Luigi; Alobeid, Bachir; Savage, David G.; Tycko, Benjamin; O’Connor, Owen Anthony; Bhagat, Govind; Vundavalli, Murty V.
: 2013
: Articles
: LymphomasCarcinogenesisPromoters (Genetics)MethylationEpigenetics

10. Stromal Protein Ecm1 Regulates Ureteric Bud Patterning and Branching

: Paroly, Suneeta S.; Wang, Fengwei; Spraggon, Lee; Merregaert, Joseph; Batourina, Ekatherina; Tycko, Benjamin; Schmidt-Ott, Kai M.; Grimmond, Sean; Little, Melissa; Mendelsohn, Cathy Lee
: 2013
: Articles
: Uterus--GrowthRetinoids--Physiological effectCytology