Author: Sims, Peter A. | Search Results | Academic Commons

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1. Deconvolution of cell type-specific drug responses in human tumor tissue with single-cell RNA-seq

: Zhao, Wenting; Dovas, Athanassios; Spinazzi, Eleonora F.; Levitin, Hanna M.; Banu, Matei A.; Upadhyayula, Pavan; Sudhakar, Tejaswi; Marie, Tamara; Otten, Marc L.; Sisti, Michael B.; Bruce, Jeffrey N.; Canoll, Peter; Sims, Peter A.
: 2021
: Articles
: RetinoblastomaNucleotide sequenceTissue slicesTumorsEtoposide

2. Single-cell characterization of macrophages in glioblastoma reveals MARCO as a mesenchymal pro-tumor marker

: Chen, Andrew X.; Gartrell, Robyn D.; Zhao, Junfei; Upadhyayula, Pavan S.; Zhao, Wenting; Yuan, Jinzhou; Minns, Hanna E.; Dovas, Athanassios; Bruce, Jeffrey N.; Lasorella, Anna; Iavarone, Antonio; Canoll, Peter; Sims, Peter A.; Rabadan, Raul
: 2021
: Articles
: RetinoblastomaCancer--ImmunotherapyMacrophages

3. Dissecting lung development and fibrosis at single-cell resolution

: Farber, Donna L.; Sims, Peter A.
: 2019
: Articles
: Lungs--DiseasesNucleotide sequencePulmonary fibrosis

4. Graph complexity analysis identifies an ETV5 tumor-specific network in human and murine low-grade glioma

: Pan, Yuan; Duron, Christina; Bush, Erin C.; Ma, Yu; Sims, Peter A.; Gutmann, David H.; Radunskaya, Ami; Hardin, Johanna
: 2018
: Articles
: GliomasGene regulatory networksGene expressionSystem analysisSystems biologyMathematics

5. SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing

: Yuan, Jinzhou; Sheng, Jenny; Sims, Peter A.
: 2018
: Articles
: Imaging systems in biologyNucleotide sequenceMicrofluidicsMolecular biology

6. An Automated Microwell Platform for Large-Scale Single Cell RNA-Seq

: Yuan, Jinzhou; Sims, Peter A.
: 2016
: Articles
: Nucleotide sequenceGene expression

7. MRI-localized biopsies reveal subtype-specific differences in molecular and cellular composition at the margins of glioblastoma

: Gill, Brian J.; Pisapia, David J.; Malone, Hani R.; Goldstein, Hannah E.; Lei, Liang; Sonabend Worthalter, Adam Mendel; Yun, Jonathan; Samanamud, Jorge; Sims, Jennifer S.; Banu, Matei Alexandru; Dovas, Athanassios; Teich, Andrew F.; Sheth, Sameer A.; McKhann, Guy M.; Sisti, Michael B.; Bruce, Jeffrey N.; Sims, Peter A.; Canoll, Peter D.
: 2014
: Articles
: Nucleotide sequenceGliomasBiologyOncology

8. TCR repertoire divergence reflects micro-environmental immune phenotypes in glioma

: Sims, Jennifer S.; Grinshpun, Boris; Feng, Yaping; Neira, Justin Anthony; Samanamud, Jorge; Canoll, Peter D.; Sims, Peter A.; Shen, Yufeng; Bruce, Jeffrey N.
: 2014
: Articles
: Glioblastoma multiformeOncology

9. Tumor-associated T cell receptor repertoires in low- and high-grade gliomas

: Sims, Jennifer S.; Grinshpun, Boris; Amendolara, Benjamin; Shen, Yufeng; Canoll, Peter D.; Sims, Peter A.; Bruce, Jeffrey N.
: 2013
: Presentations (Communicative Events)
: AstrocytomasGliomasT cells--ReceptorsExcision (Surgery)Cancer--SurgeryGlioblastoma multiformeOncologySurgeryMedicine