1. Mutational signatures reveal ternary relationships between homologous recombination repair, APOBEC, and mismatch repair in gynecological cancers Farmanbar, Amir; Firouzi, Sanaz; Kneller, Robert; Khiabanian, Hossein 2022 Articles Generative organs, Female--CancerUterus--CancerMutagenesisDNA damageOvaries--Cancer
2. Evolutionary Dynamics of Pandemic Methicillin-Sensitive Staphylococcus aureus ST398 and Its International Spread via Routes of Human Migration Uhlemann, Anne-Catrin; McAdam, Paul R.; Sullivan, Sean B.; Knox, Justin R.; Khiabanian, Hossein; Rabadan, Raul; Davies, Peter R.; Fitzgerald, J. Ross; Lowy, Franklin D. 2017 Articles Staphylococcus aureusGenomes--Data processingHuman beings--MigrationsSystems biology
3. De novo transcriptome reconstruction and annotation of the Egyptian rousette bat Lee, Albert Kim; Kulcsar, Kirsten A.; Elliott, Oliver T.; Khiabanian, Hossein; Nagle, Elyse R.; Jones, Megan E.B.; Amman, Brian R.; Sanchez-Lockhart, Mariano; Towner, Jonathan S.; Palacios, Gustavo; Rabadan, Raul 2015 Articles Marburg virus diseaseVirus diseases--PathogenesisHost-virus relationshipsMorphologyVirology
4. Data-driven discovery of seasonally linked diseases from an Electronic Health Records system Melamed, Rachel; Khiabanian, Hossein; Rabadan, Raul 2014 Articles Diseases--Seasonal variationsBioinformatics
5. Genetics of follicular lymphoma transformation Pasqualucci, Laura; Khiabanian, Hossein; Fangazio, Marco; Vasishtha, Mansi; Messina, Monica; Holmes, Antony B.; Ouillette, Peter; Trifonov, Vladimir; Rossi, Davide; Tabbò, Fabrizio; Ponzoni, Maurilio; Chadburn, Amy; Vundavalli, Murty V.; Bhagat, Govind; Gaidano, Gianluca; Inghirami, Giorgio; Malek, Sami N.; Rabadan, Raul; Dalla-Favera, Riccardo 2014 Articles GenomicsGeneticsLymphomasCarcinogenesis
6. Leukemogenesis Induced by an Activating β-catenin mutation in Osteoblasts Kode, Aruna; Manavalan, John S.; Mosialou, Ioanna; Bhagat, Govind; Rathinam, Chozha Vendan; Luo, Na; Khiabanian, Hossein; Lee, Albert Kim; Vundavalli, Murty V.; Friedman, Richard A.; Brum, Andrea; Park, David; Galili, Naomi; Mukherjee, Siddhartha; Teruya-Feldstein, Julie; Raza, Azra; Rabadan, Raul; Berman, Ellin; Kousteni, Stavroula 2014 Articles Leukemia--EtiologyOsteoblastsCateninsCarcinogenesisPathologyMedicine
7. Transcriptome reconstruction and annotation of cynomolgus and African green monkey Lee, Albert Kim; Khiabanian, Hossein; Kugelman, Jeffrey; Elliott, Oliver T.; Nagle, Elyse; Yu, Guo-Yun; Warren, Travis; Palacios, Gustavo; Rabadan, Raul 2014 Articles BioinformaticsGenetics
8. Viral diversity and clonal evolution from unphased genomic data Khiabanian, Hossein; Carpenter, Zachary; Kugelman, Jeffrey; Chan, Joseph; Trifonov, Vladimir; Nagle, Elyse; Warren, Travis; Iversen, Patrick; Bavari, Sina; Palacios, Gustavo; Rabadan, Raul 2014 Articles GenomicsCytologyBioinformatics
9. Understanding the Origins of a Pandemic Virus Hernandez, Carlos Xavier; Chan, Joseph M.; Khiabanian, Hossein; Rabadan, Raul 2011 Articles Public healthBioinformatics
10. Signs of the 2009 Influenza Pandemic in the New York-Presbyterian Hospital Electronic Health Records Khiabanian, Hossein; Holmes, Antony B.; Kelly, Brendan J.; Gururaj, Mrinalini; Hripcsak, George M.; Rabadan, Raul 2010 Articles MedicineStatisticsPublic health