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Dynamics of semiflexible polymers in a flow field

Munk, Tobias; Hallatschek, Oskar; Wiggins, Chris H.; Frey, Erwin

We present a method to investigate the dynamics of a single semiflexible polymer, subject to anisotropic friction in a viscous fluid. In contrast to previous approaches, we do not rely on a discrete bead-rod model, but introduce a suitable normal mode decomposition of a continuous space curve. By means of a perturbation expansion for stiff filaments, we derive a closed set of coupled Langevin equations in mode space for the nonlinear dynamics in two dimensions, taking into account exactly the local constraint of inextensibility. The stochastic differential equations obtained this way are solved numerically, with parameters adjusted to describe the motion of actin filaments. As an example, we show results for the tumbling motion in shear flow.

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Title
Physical Review E
DOI
https://doi.org/10.1103/PhysRevE.74.041911

More About This Work

Academic Units
Applied Physics and Applied Mathematics
Publisher
American Physical Society
Published Here
September 19, 2014