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ExpressionPlot: a web-based framework for analysis of RNA-Seq and microarray gene expression data

Friedman, Brad; Maniatis, Tom

RNA-Seq and microarray platforms have emerged as important tools for detecting changes in gene expression and RNA processing in biological samples. We present ExpressionPlot, a software package consisting of a default back end, which prepares raw sequencing or Affymetrix microarray data, and a web-based front end, which offers a biologically centered interface to browse, visualize, and compare different data sets. Download and installation instructions, a user's manual, discussion group, and a prototype are available at http://expressionplot.com

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Also Published In

Title
Genome Biology
DOI
https://doi.org/10.1186/gb-2011-12-7-r69

More About This Work

Academic Units
Biochemistry and Molecular Biophysics
Publisher
BioMed Central
Published Here
September 8, 2014