Academic Commons

Search Constraints

Start Over
You searched for: Subject Genomics Remove constraint Subject: Genomics
1 - 91 of 91
Number of results to display per page

Search Results

1. A high-resolution map of human chromosome 12

Montgomery, Kate; Lee, Eunice; Miller, Ashley; Lau, Stephanie; Shim, Cecilia; Decker, Jeremy; Chiu, Denise; Emerling, Suzanne; Sekhon, Mandeep; Kim, Rachel; Lenz, Jack; Han, Jinghua; Ioshikhes, Ilya; Renault, Beatrice; Marondel, Ivonne; Yoon, Sung-Joo Kim; Song, Kyuyoung; Vundavalli, Murty V.; Scherer, Steven; Yonescu, Raluca; Kirsch, Ilan; Ried, Thomas; McPherson, John; Gibbs, Richard; Kucherlapati, Raju
2001
Articles
GenomicsGeneticsGene mappingHuman gene mapping

2. Analysis of Copy Number Variation in Alzheimer’s Disease in a Cohort of Clinically Characterized and Neuropathologically Verified Individuals

Swaminathan, Shanker
2012
Articles
Alzheimer's disease--Genetic aspectsGenomicsNeurology

3. An improved statistical model for taxonomic assignment of metagenomics

Yao, Yujing; Jin, Zhezhen; Lee, Joseph H.
2018
Articles
MetagenomicsCladistic analysisStatistical matchingGenomics

4. A role for the unfolded protein response stress sensor ERN1 in regulating the response to MEK inhibitors in KRAS mutant colon cancers

Šuštić, Tonći; van Wageningen, Sake; Bosdriesz, Evert; Reid, Robert J. D.; Dittmar, John; Lieftink, Cor; Beijersbergen, Roderick L.; Wessels, Lodewyk F. A.; Rothstein, Rodney; Bernards, René
2018
Articles
Mutation (Biology)Colon (Anatomy)--CancerGenomicsMolecular biology

5. A Simple Test of Class-Level Genetic Association Can Reveal Novel Cardiometabolic Trait Loci

Qian, Jing; Nunez, Sara; Reed, Eric; Reilly, Muredach Patrick; Foulkes, Andrea S.
2016
Articles
EigenvaluesGenomicsMedical geneticsMeta-analysisGeneticsBiometryMicrobiology

6. Assignment of the Human TYRP (brown) Locus to Chromosome Region 9p23 by Nonradioactive in Situ Hybridization

Vundavalli, Murty V.; Bouchard, Brigitte; Mathew, Susan; Vijayasaradhi, Setaluri; Houghton, Alan
1992
Articles
GenomicsMelanoma--Genetic aspectsFluorescence in situ hybridization

7. Association of Researcher Characteristics with Views on Return of Incidental Findings from Genomic Research

Wynn, Julia; Martinez, Josue Natanael; Duong, Jimmy; Zhang, Yuan; Phelan, Jo C.; Fyer, Abby; Klitzman, Robert L.; Appelbaum, Paul S.; Chung, Wendy K.
2015
Articles
GenomicsGeneticsHuman chromosome abnormalities--DiagnosisResearch--Moral and ethical aspectsBioethics

8. A Study of Secondary School Students’ Participation in a Novel Course on Genomic Principles and Practices

Stefanile, Adam
2020
Theses
Science--Study and teachingGenomicsEducation, SecondaryLiteracy--Study and teaching (Secondary)

9. Biallelic expression of HRAS and MUCDHL in human and mouse

Goldberg, Michael E.; Wei, Michelle L.; Yuan, Luwa; Vundavalli, Murty V.; Tycko, Benjamin
2003
Articles
GeneticsGenomicsGenomic imprinting

10. Biology of maintenance and de novo methylation mediated by DNA methyltransferase-1

Yarychkivska, Olga
2017
Theses
DNA--MethylationMethyltransferasesDNA replicationCell divisionGenomicsGeneticsBiochemistryBiology

11. Birth and death of protein domains: A simple model of evolution explains power law behavior

Karev, Georgy; Wolf, Yuri; Rzhetsky, Andrey; Berezovskaya, Faina; Koonin, Eugene
2002
Articles
Evolution (Biology)--Mathematical modelsProteins--MetabolismGenomicsEvolution (Biology)Molecular biology

12. Broadening horizons: holistic viewpoints from the Biology of Genomes

Carr, Ambrose James; Pe'er, Dana
2014
Articles
Medical transcriptionMutation (Biology)GenomicsBiologyBiomechanics

13. Causal modeling in a multi-omic setting: insights from GAW20

Auerbach, Jonathan; Howey, Richard; Jiang, Lai; Justice, Anne; Li, Liming; Oualkacha, Karim; Sayols-Baixeras, Sergi; Aslibekyan, Stella W.
2018
Articles
GenomicsLipidsDiseasesStatistics

14. Characterization of a novel fusion gene EML4-NTRK3 in a case of recurrent congenital fibrosarcoma

Tannenbaum-Dvir, Sarah; Glade Bender, Julia L.; Church, Alanna J.; Janeway, Katherine A.; Harris, Marian H.; Mansukhani, Mahesh M.; Nagy, Peter L.; Andrews, Stuart J.; Vundavalli, Murty V.; Kadenhe-Chiweshe, Angela; Connolly, Eileen Patricia; Kung, Andrew L.; Cruz, Filemon S. Dela
2015
Articles
GenomicsCytogeneticsCancerSarcomaCase studies

15. Characterization of kinase gene expression and splicing profile in prostate cancer with RNA-Seq data

Feng, Huijuan; Li, Tingting; Zhang, Xuegong
2018
Articles
Prostate--CancerGene expressionRNA splicingProtein kinasesGenomicsBioinformatics

16. Characterizing the expression of the human olfactory receptor gene family using a novel DNA microarray

Zhang, Xiaohong; M Pinto, Jayant; De la Cruz, Omar; Nicolae, Dan; Firestein, Stuart J.; Gilad, Yoav
2007
Articles
MammalsDNA microarraysOlfactory receptorsGenomics

17. Characterizing the expression of the human olfactory receptor gene family using a novel DNA microarray

Zhang, Xiaohong; De la Cruz, Omar; Pinto, Jayant M.; Nicolae, Dan; Firestein, Stuart; Gilad, Yoav
2007
Articles
DNA microarraysEpithelial cellsOlfactory receptorsGenomics

18. CisOrtho: A program pipeline for genome-wide identification of transcription factor target genes using phylogenetic footprinting

Bigelow, Henry; Wenick, Adam; Wong, Allan; Hobert, Oliver
2004
Articles
GenomicsComputer softwareComputer scienceMolecular biology

19. Computational genomics and genetics of developmental disorders

Qi, Hongjian
2018
Theses
BiometryGenomicsDevelopmental disabilities--Genetic aspects

20. Correction: A dual clustering framework for association screening with whole genome sequencing data and longitudinal traits

Liu, Ying; Huang, Chien-Hsun; Hu, Inchi; Lo, Shaw-Hwa; Zheng, Tian
2014
Articles
GenomicsBiometry

21. Creation and characterization of BAC-transgenic mice with physiological over-expression of epitope-tagged RCAN1 (DSCR1)

Xing, Luzhou; Salas, Martha; Zhang, Hong; Gittler, Julia; Ludwig, Thomas; Lin, Chyuan-Sheng; Vundavalli, Murty V.; Silverman, Wayne; Arancio, Ottavio; Tycko, Benjamin
2013
Articles
GenomicsGeneticsHuman chromosome 21Down syndrome--Genetic aspectsTransgenic mice

22. CRISPR-mediated genome editing of Plasmodium falciparum malaria parasites

Lee, Marcus C. S.; Fidock, David Armand
2014
Articles
GenomicsMalaria--TreatmentMalaria--PreventionBiochemistry

23. Cutting Edge: Using mobile sequencers in an academic classroom

Zaaijer, Sophie; Erlich, Yaniv; Columbia University Ubiquitous Genomics 2015 class
2016
Articles
Nucleotide sequenceScience--Study and teaching--Technological innovationsGenomicsEducational technologyEducation--Curricula

24. De novo and inherited private variants in MAP1B in periventricular nodular heterotopia

Heinzen, Erin L.; O’Neill, Adam C.; Zhu, Xiaolin; Allen, Andrew S.; Bahlo, Melanie; Chelly, Jamel; Chen, Ming Hui; Dobyns, William B.; Freytag, Saskia; Guerrini, Renzo; Leventer, Richard J.; Poduri, Annapurna; Robertson, Stephen P.; Walsh, Christopher A.; Zhang, Mengqi; Epilepsy Phenome/Genome Project; Epi4K Consortium
2018
Articles
GeneticsNeurosciencesEpilepsyGenomics

25. De novo likelihood-based measures for comparing genome assemblies

Ghodsi, Mohammadreza; Hill, Christopher; Astrovskaya, Irina; Lin, Henry; Sommer, Dan; Koren, Sergey; Pop, Mihai
2013
Articles
Nucleotide sequence--SoftwareBiotechnology--ResearchGenomicsGeneticsBioinformaticsBiomedical engineering

26. Detecting transcriptionally active regions using genomic tiling arrays

Halasz, Gabor; van Batenburg, Marinus F.; Perusse, Joelle; Hua, Sujun; Lu, Xiang-Jun; White, Kevin P.; Bussemaker, Harmen J.
2006
Articles
Genetic transcriptionDNA probesGenomicsDNA microarraysGeneticsBioinformatics

27. Epigenetic Alterations Affecting Transcription Factors and Signaling Pathways in Stromal Cells of Endometriosis

Yotova, Iveta; Hsu, Emily; Do, Catherine; Gaba, Aulona; Sczabolcs, Matthias; Dekan, Sabine; Kenner, Lukas; Wenzl, Rene; Tycko, Benjamin
2017
Articles
Medical geneticsMethylationEndometriosisGenomics

28. Epigenome-wide association study of total serum immunoglobulin E in children: a life course approach

Peng, Cheng; Cardenas, Andres; Rifas-Shiman, Sheryl L.; Hivert, Marie-France; Gold, Diane R.; Platts-Mills, Thomas A.; Lin, Xihong; Oken, Emily; Baccarelli, Andrea A.; Litonjua, Augusto A.; DeMeo, Dawn L.
2018
Articles
Immunoglobulin EEpigeneticsGenomicsEnvironmental health

29. Evaluating whole genome sequence data from the Genetic Absence Epilepsy Rat from Strasbourg and its related non-epileptic strain

Casillas-Espinosa, Pablo M.; Powell, Kim L.; Zhu, Mingfu; Campbell, C. Ryan; Maia, Jessica M.; Ren, Zhong; Jones, Nigel C.; O’Brien, Terence J.; Petrovski, Slave
2017
Articles
Nucleotide sequenceGenomesGeneticsEpilepsyGenomics

30. Gene copy number variation in natural populations of Plasmodium falciparum in Eastern Africa

Simam, Joan; Rono, Martin; Ngoi, Joyce; Nyonda, Mary; Mok, Sachel Shu Li; Marsh, Kevin; Bozdech, Zbynek; Mackinnon, Margaret
2018
Articles
GenomicsPlasmodium falciparumMicrobiologyAdaptation (Biology)

31. Gene Dosage Alterations Revealed by cDNA Microarray Analysis in Cervical Cancer: Identification of Candidate Amplified and Overexpressed Genes

Narayan, Gopeshwar; Bourdon, Veronique; Chaganti, Seeta; Arias-Pulido, Hugo; Nandula, Subhadra; Rao, Pulivarthi; Gissmann, Lutz; Dürst, Matthias; Schneider, Achim; Pothuri, Bhavana; Mansukhani, Mahesh M.; Basso, Katia; Chaganti, R.S.K.; Vundavalli, Murty V.
2007
Articles
GeneticsGenomicsCervix uteri--CancerOverexpression (Genetics)Gene amplification

32. Genetic Analysis of the APAF1 Gene in Male Germ Cell Tumors

Bala, Shashi; Oliver, Holt; Renault, Beatrice; Montgomery, Kate; Dutta, Shipra; Rao, Pulivarthi; Houldsworth, Jane; Kucherlapati, Raju; Wang, X.; Vundavalli, Murty V.
2000
Articles
Germ cellsTumorsCytogeneticsGenomics

33. Genetic landscape of T- and NK-cell post-transplant lymphoproliferative disorders

Margolskee, Elizabeth; Jobanputra, Vaidehi; Jain, Preti; Chen, Jinli; Ganapathi, Karthik; Nahum, Odelia; Levy, Brynn; Morscio, Julie; Vundavalli, Murty V.; Tousseyn, Thomas; Alobeid, Bachir; Mansukhani, Mahesh M.; Bhagat, Govind
2016
Articles
GenomicsGeneticsLymphoproliferative disordersImmunodeficiencyKiller cellsT cells

34. Genetic Polymorphisms of XRCC1 and Leukemia Risk: A Meta-Analysis of 19 Case-Control Studies

Zhang, Haijun; Liu, Hang; Jiang, Gaofeng
2013
Articles
Meta-analysisGenetic polymorphismsLeukemiaGenomics

35. Genetics of follicular lymphoma transformation

Pasqualucci, Laura; Khiabanian, Hossein; Fangazio, Marco; Vasishtha, Mansi; Messina, Monica; Holmes, Antony B.; Ouillette, Peter; Trifonov, Vladimir; Rossi, Davide; Tabbò, Fabrizio; Ponzoni, Maurilio; Chadburn, Amy; Vundavalli, Murty V.; Bhagat, Govind; Gaidano, Gianluca; Inghirami, Giorgio; Malek, Sami N.; Rabadan, Raul; Dalla-Favera, Riccardo
2014
Articles
GenomicsGeneticsLymphomasCarcinogenesis

36. Genome characterization of Long Island tick rhabdovirus, a new virus identified in Amblyomma americanum ticks

Tokarz, Rafal; Sameroff, Stephen Christopher; Leon, Maria; Jain, Komal; Lipkin, W. Ian
2014
Articles
RhabdovirusesGenomicsTicksVirology

37. Genome Wide Analysis of Drug-Induced Torsades de Pointes: Lack of Common Variants with Large Effect Sizes

Behr, Elijah R.; Ritchie, Marylyn D.; Tanaka, Toshihiro; Kääb, Stefan; Crawford, Dana C.; Nicoletti, Paola; Floratos, Aristidis; Kannankeril, Prince J.; Sinner, Moritz F.; M. Wilde, Arthur A.; Bezzina, Connie R.; Schulze-Bahr, Eric; Zumhagen, Sven; Guicheney, Pascale; Bishopric, Nanette H.; Marshall, Vanessa; Shakir, Saad; Dalageorgou, Chrysoula; Jamshidi, Yalda; Bevan, Steve; Bastiaenen, Rachel; Myerburg, Robert J.; Schott, Jean-Jacques; Camm, A. John; Steinbeck, Gerhard; Norris, Kris; Altman, Russ B.; Tatonetti, Nicholas P.; Jeffery, Steve; Kubo, Michiaki; Nakamura, Yusuke; Shen, Yufeng; George Jr, Alfred L.; Roden, Dan M.
2013
Articles
Medical geneticsVentricular tachycardiaDrug interactionsGenomics

38. Genome-Wide and Differential Proteomic Analysis of Hepatitis B Virus and Aflatoxin B1 Related Hepatocellular Carcinoma in Guangxi, China

Qi, Lu-Nan; Li, Le-Qun; Chen, Yuan-Yuan; Chen, Zhao-Hong; Bai, Tao; Xiang, Bang-De; Qin, Xiao; Xiao, Kai-Yin; Peng, Min-Hao; Liu, Zhi-Ming; Liu, Tang-Wei; Qin, Xue; Li, Shan; Han, Ze-Guang; Mo, Zeng-Nan; Santella, Regina M.; Winkler, Cheryl A.; O’Brien, Stephen J.; Peng, Tao
2013
Articles
CarcinogenesisGene expressionChromosomesGenomics

39. Genome-Wide Association of Body Fat Distribution in African Ancestry Populations Suggests New Loci

Liu, Ching-Ti; Monda, Keri L.; Taylor, Kira C.; Lange, Leslie; Demerath, Ellen W.; Palmas, Walter R.; Wojczynski, Mary K.; Ellis, Jaclyn C.; Vitolins, Mara Z.; Liu, Simin; Papanicolaou, George J.; Irvin, Marguerite R.; Xue, Luting; Griffin, Paula J.; Nalls, Michael A.; Adeyemo, Adebowale; Liu, Jiankang; Li, Guo; Ruiz-Narvaez, Edward A.; Chen, Wei-Min; Chen, Fang; Henderson, Brian E.; Millikan, Robert C.; Ambrosone, Christine B.; Strom, Sara S.; Guo, Xiuqing; Andrews, Jeanette S.; Sun, Yan V.; Mosley, Thomas H.; Yanek, Lisa R.; Shriner, Daniel; Haritunians, Talin; Rotter, Jerome I.; Speliotes, Elizabeth K.; Smith, Megan; Rosenberg, Lynn; Mychaleckyj, Josyf; Nayak, Uma; Spruill, Ida; Garvey, W. Timothy; Pettaway, Curtis; Nyante, Sarah; Bandera, Elisa V.; Britton, Angela F.; Zonderman, Alan B.; Rasmussen-Torvik, Laura J.; Chen, Yii-Der Ida; Ding, Jingzhong; Lohman, Kurt; Kritchevsky, Stephen B.; Zhao, Wei; Peyser, Patricia A.; Kardia, Sharon L. R.; Kabagambe, Edmond; Broeckel, Ulrich; Chen, Guanjie; Zhou, Jie; Wassertheil-Smoller, Sylvia; Neuhouser, Marian L.; Rampersaud, Evadnie; Psaty, Bruce; Kooperberg, Charles; Manson, JoAnn E.; Kuller, Lewis H.; Ochs-Balcom, Heather M.; Johnson, Karen C.; Sucheston, Lara; Ordovas, Jose M.; Palmer, Julie R.; Haiman, Christopher A.; McKnight, Barbara; Howard, Barbara V.; Becker, Diane M.; Bielak, Lawrence F.; Liu, Yongmei; Allison, Matthew A.; Grant, Struan F. A.; Burke, Gregory L.; Patel, Sanjay R.; Schreiner, Pamela J.; Borecki, Ingrid B.; Evans, Michele K.; Taylor, Herman; Sale, Michele M.; Howard, Virginia; Carlson, Christopher S.; Rotimi, Charles N.; Cushman, Mary; Harris, Tamara B.; Reiner, Alexander P.; Cupples, L. Adrienne; North, Kari E.; Fox, Caroline S.
2013
Articles
Obesity--Genetic aspectsAfrican Americans--Health and hygieneGene mappingGenomicsGeneticsMolecular biologyEpidemiology

40. Genome-wide pleiotropy analysis of neuropathological traits related to Alzheimer’s disease

Chung, Jaeyoon; Zhang, Xiaoling; Allen, Mariet; Wang, Xue; Ma, Yiyi; Beecham, Gary; Montine, Thomas J.; Younkin, Steven G.; Dickson, Dennis W.; Golde, Todd E.; Price, Nathan D.; Ertekin-Taner, Nilüfer; Lunetta, Kathryn L.; Mez, Jesse; Mayeux, Richard Paul; Haines, Jonathan L.; Pericak-Vance, Margaret A.; Schellenberg, Gerard; Jun, Gyungah R.; Farrer, Lindsay A.; The Alzheimer Disease Genetics Consortium
2018
Articles
Nervous system--DiseasesAlzheimer's disease--ResearchGenomicsGenetics

41. Genomic and Expression Analysis of the 12p11-p12 Amplicon Using EST Arrays Identifies Two Novel Amplified and Overexpressed Genes

Bourdon, Veronique; Naef, Félix; Rao, Pulivarthi; Reuter, Victor; Mok, Samuel C.; Bosl, George; Koul, Sanjay; Vundavalli, Murty V.; Kucherlapati, Raju; Chaganti, R.S.K.
2002
Articles
GenomicsOvaries--Cancer--Genetic aspectsTestis--CancerComparative genomic hybridizationOverexpression (Genetics)

42. Genomic and Geographic Context for the Evolution of High-Risk Carbapenem-Resistant Enterobacter cloacae Complex Clones ST171 and ST78

Gomez-Simmonds, Angela; Annavajhala, Medini; Wang, Z.; Macesic, Nenad; Hu, Yue; Giddins, Marla J.; O’Malley, Aidan; Toussaint, Nora C.; Whittier, Susan; Torres, Victor J.; Uhlemann, Anne-Catrin
2018
Articles
GeomicrobiologyImmunologyMedicine, PreventiveDrug resistance in microorganismsEnterobacter cloacaeGenomics

43. Genomic Evolution of Glioblastoma

Ladewig, Erik
2018
Theses
GenomicsTumorsComputational biologyBiology

44. Genomic Profiling Maps Loss of Heterozygosity and Defines the Timing and Stage Dependence of Epigenetic and Genetic Events in Wilms’ Tumors

Yuan, Eric; Li, Chi-Ming; Yamashiro, Darrell J.; Kandel, Jessica J.; Thaker, Harshwardhan; Vundavalli, Murty V.; Tycko, Benjamin
2005
Articles
GenomicsGeneticsEpigeneticsNephroblastoma

45. Genomic regions associated with susceptibility to Barrett’s esophagus and esophageal adenocarcinoma in African Americans: The cross BETRNet admixture study

Sun, Xiangqing; Chandar, Apoorva K.; Canto, Marcia I.; Thota, Prashanthi N.; Brock, Malcom; Shaheen, Nicholas J.; Beer, David G.; Wang, Jean S.; Falk, Gary W.; Iyer, Prasad G.; Abrams, Julian A.; Venkat-Ramani, Medha; Veigl, Martina; Miron, Alexander; Willis, Joseph; Patil, Deepa T.; Nalbantoglu, Ilke; Guda, Kishore; Markowitz, Sanford D.; Zhu, Xiaofeng; Elston, Robert; Chak, Amitabh
2017
Articles
GenomicsBarrett's esophagusAdenocarcinomaAfrican AmericansHuman gene mapping

46. Genomic surveys by methylation-sensitive SNP analysis identify sequence-dependent allele-specific DNA methylation

Kerkel, Kristi; Spadola, Alexandra; Yuan, Eric; Kosek, Jolanta; Jiang, Le; Hod, Eldad Arie; Li, Kerry; Vundavalli, Murty V.; Schupf, Nicole; Vilain, Eric; Morris, Mitzi; Haghighi, Fatemeh; Tycko, Benjamin
2008
Articles
DNA--MethylationGeneticsGenomicsHuman genome

47. Identification of Copy Number Gain and Overexpressed Genes on Chromosome Arm 20q by an Integrative Genomic Approach in Cervical Cancer: Potential Role in Progression

Scotto, Luigi; Narayan, Gopeshwar; Nandula, Subhadra; Arias-Pulido, Hugo; Subramaniyam, Shivakumar; Schneider, Achim; Kaufmann, Andreas; Wright, Jason D.; Pothuri, Bhavana; Mansukhani, Mahesh M.; Vundavalli, Murty V.
2008
Articles
GenomicsCervix uteri--CancerOverexpression (Genetics)Carcinogenesis

48. Identification of differentially expressed genes and pathways in mice exposed to mixed field neutron/photon radiation

Broustas, Constantinos; Harken, Andrew Dennis; Garty, Guy Y.; Amundson, Sally A.
2018
Articles
GenomicsGene expressionRadiation dosimetryNeutron irradiationPhoton emission

49. Impact of Receiving Secondary Results from Genomic Research: A 12‐Month Longitudinal Study

Wynn, Julia; Martinez, Josue Natanael; Bulafka, Jessica; Duong, Jimmy; Zhang, Y.; Chiuzan, Codruta; Preti, Jain; Cremona, Maria L.; Jobanputra, Vaidehi; Fyer, Abby; Klitzman, Robert L.; Appelbaum, Paul S.; Chung, Wendy K.
2018
Articles
GenomicsGenetic counselingBioethics

50. Independent impacts of aging on mitochondrial DNA quantity and quality in humans

Zhang, Ruoyu; Wang, Yiqin; Ye, Kaixiong; Picard, Martin; Gu, Zhenglong
2017
Articles
GenomicsNucleotide sequenceAgingMitochondrial DNABiology

51. Informed consent for return of incidental findings in genomic research

Appelbaum, Paul S.; Waldman, Cameron R.; Fyer, Abby; Klitzman, Robert L.; Parens, Erik; Martinez, Josue Natanael; Price II, W. Nicholson; Chung, Wendy K.
2014
Articles
GenomicsMedical ethicsInformed consent (Medical law)

52. Integrative genomic approaches in cervical cancer: implications for molecular pathogenesis

Narayan, Gopeshwar; Vundavalli, Murty V.
2010
Articles
Cervix uteri--CancerCervix uteri--Cancer--TreatmentGene expressionGenomics

53. Lack of PTEN sequesters CHK1 and initiates genetic instability

Puc, Janusz; Keniry, Megan; Li, Hong Shen; Pandita, Tej K.; Choudhury, Atish D.; Memeo, Lorenzo; Mansukhani, Mahesh M.; Vundavalli, Murty V.; Gaciong, Zbigniew; Meek, Sarah E.M.; Piwnica-Worms, Helen; Hibshoosh, Hanina; Parsons, Ramon E.
2005
Articles
CytogeneticsGenomicsCarcinogenesisPhosphorylation

54. Large-Scale Genome-Wide Association Studies and Meta-Analyses of Longitudinal Change in Adult Lung Function

Tang, Wenbo; Kowgier, Matthew; Loth, Daan W.; Artigas, María Soler; Joubert, Bonnie R.; Hodge, Emily; Gharib, Sina A.; Smith, Albert V.; Ruczinski, Ingo; Gudnason, Vilmundur; Mathias, Rasika A.; Hansel, Nadia N.; Harris, Tamara B.; Barnes, Kathleen C.; Albrecht, Eva; Launer, Lenore J.; Hansen, Joyanna G.; Aldrich, Melinda C.; Allerhand, Michael; Barr, R. Graham; Brusselle, Guy G.; Curjuric, Ivan; Davies, Gail; Couper, David J.; Deary, Ian J.; Dupuis, Josée; Foy, Millennia; Franceschini, Nora; Fall, Tove; Gao, Wei; Gläser, Sven; Gu, Xiangjun; Hancock, Dana B.; Heinrich, Joachim; Hofman, Albert; Imboden, Medea; Ingelsson, Erik; James, Alan; Karrasch, Stefan; Koch, Beate; Kritchevsky, Stephen B.; Kumar, Ashish; Li, Guo; Lahousse, Lies; Lind, Lars; Liu, Yongmei; Lindgren, Cecilia; Lohman, Kurt; Lumley, Thomas; McArdle, Wendy L.; Meibohm, Bernd; Morris, Andrew P.; Morrison, Alanna C.; Musk, Bill; North, Kari E.; Palmer, Lyle J.; Probst-Hensch, Nicole M.; Psaty, Bruce M.; Rivadeneira, Fernando; Rotter, Jerome I.; Schulz, Holger; Sood, Akshay; Smith, Lewis J.; Starr, John M.; Uitterlinden, André G.; Strachan, David P.; Teumer, Alexander; Voorman, Arend; Völzke, Henry; Wain, Louise V.; Wells, Martin T.; Williams, O. Dale; Wilk, Jemma B.; Heckbert, Susan R.; Stricker, Bruno H.; London, Stephanie J.; Fornage, Myriam; Tobin, Martin D.; O′Connor, George T.; Cassano, Patricia A.; Hall, Ian P.
2014
Articles
LungsGene expressionGenomicsGenetics

55. Looping Genomes: Diagnostic Change and the Genetic Makeup of the Autism Population

Navon, Daniel; Eyal, Gil
2016
Articles
GenomicsGenomesSociologyAutismGenetics

56. Loss of LIN-35, the Caenorhabditis elegans ortholog of the tumor suppressor p105Rb, results in enhanced RNA interference

Lehner, Ben; Calixto, Andrea; Crombie, Catriona; Tischler, Julia; Fortunato, Angelo; Chalfie, Martin; Fraser, Andrew
2006
Articles
Caenorhabditis elegansGenomicsRNA intereferenceGeneticsBioinformaticsBiology

57. Loss of PRDM1/BLIMP-1 function contributes to poor prognosis of activated B-cell-like diffuse large B-cell lymphoma

Xia, Y.; Xu-Monette, Z. Y.; Tzankov, A.; Li, X.; Manyam, G. C.; Vundavalli, Murty V.; Bhagat, Govind; Zhang, S.; Pasqualucci, Laura; Visco, C.; Dybkaer, K.; Chiu, A.; Orazi, A.; Zu, Y.; Richards, K. L.; Hsi, E. D.; Choi, W. W. L.; van Krieken, J. H.; Huh, J.; Ponzoni, M.; Ferreri, A. J. M.; Møller, M. B.; Parsons, B. M.; Winter, J. N.; Piris, M. A.; Westin, J.; Fowler, N.; Miranda, R. N.; Ok, C. Y.; Li, Y.; Li, J.; Medeiros, L. J.; Young, K. H.
2016
Articles
GenomicsCancer--Genetic aspectsLymphomasBcl-2 protein familyPrognosis

58. Loss of spermatogonia and wide-spread DNA methylation defects in newborn male mice deficient in DNMT3L

La Salle, Sophie; Oakes, Christopher; Neaga, Oana; Bourc'his, Déborah; Bestor, Timothy H.; Trasler, Jacquetta
2007
Articles
SpermatogenesisEpigeneticsDNA--MethylationGenomicsHaploidy

59. Machine learning and data mining in complex genomic data a review on the lessons learned in Genetic Analysis Workshop Nineteen

Konig, Inke R.; Auerbach, Jonathan Lyle; Gola, Damian; Held, Elizabeth; Holzinger, Emily R.; Legault, Marc Andre; Sun, Rui; Tintle, Nathan; Yang, Hsin Chou
2016
Articles
Machine learningData miningGenomics

60. Mapping common deleted regions on 5p15 in cervical carcinoma and their occurrence in precancerous lesions

Arias-Pulido, Hugo; Narayan, Gopeshwar; Vargas, Hernan; Mansukhani, Mahesh M.; Vundavalli, Murty V.
2002
Articles
Cervix uteri--CancerCarcinogenesisCytogeneticsGenomics

61. Models of Consent to Return of Incidental Findings in Genomic Research

Appelbaum, Paul S.; Parens, Erik; Waldman, Cameron R.; Klitzman, Robert L.; Fyer, Abby; Martinez, Josue Natanael; Price II, W. Nicholson; Chung, Wendy K.
2014
Articles
GenomicsMedical ethicsInformed consent (Medical law)

62. Molecular Cytogenetic Applications in Analysis of the Cancer Genome

Rao, Pulivarthi; Nandula, Subhadra; Vundavalli, Murty V.
2007
Articles
GenomicsCytogeneticsCancerChromosome abnormalitiesComparative genomic hybridizationFluorescence in situ hybridization

63. One in Four Individuals of African-American Ancestry Harbors a 5.5kb Deletion at chromosome 11q13.1

Zainabadi, Kayvan; Jain, Anuja V.; Donovan, Frank X.; Elashoff, David; Rao, Nagesh P.; Vundavalli, Murty V.; Chandrasekharappa, Settara C.; Srivatsan, Eri S.
2014
Articles
GenomicsChromosomesSingle nucleotide polymorphismsLinkage (Genetics)African AmericansCervix uteri--Cancer

64. Orion: Detecting regions of the human non-coding genome that are intolerant to variation using population genetics

Gussow, Ayal B.; Copeland, Brett; Dhindsa, Ryan; Wang, Quanli; Petrovski, Slave; Majoros, William H.; Allen, Andrew S.; Goldstein, David B.
2017
Articles
Human genomePopulation geneticsNon-coding RNABioinformaticsGenomics

65. PathBLAST: a tool for alignment of protein interaction networks

Kelley, Brian P.; Yuan, Bingbing; Sharan, Roded; Lewitter, Fran; Stockwell, Brent R.; Ideker, Trey
2004
Articles
GenomicsProtein-protein interactionsGenetics

66. Pathogenic Mutations in Cancer-Predisposing Genes: A Survey of 300 Patients with Whole-Genome Sequencing and Lifetime Electronic Health Records

He, Karen Y.; Zhao, Yiqing; McPherson, Elizabeth W.; Li, Quan; Wang, Kai; Xia, Fan; Weng, Chunhua; He, Max M.
2016
Articles
Human geneticsCancer--Genetic aspectsHuman genetics--Data processingMedical records--Data processingGenomicsMedicineGeneticsBioinformatics

67. Photochemical and Enzymatic Method for DNA Methylation Profiling and Walking Approach for Increasing Read Length of DNA Sequencing by Synthesis

Erturk, Ece
2018
Theses
Chemical engineeringNucleotide sequenceDNA--MethylationPhotochemistryGenomics

68. Pilot Study of Return of Genetic Results to Patients in Adult Nephrology

Nestor, Jordan Gabriela; Marasa, Maddalena; Milo-Rasouly, Hila; Groopman, Emily; Husain, Syed Ali; Mohan, Sumit; Fernandez, Hilda Elena; Aggarwal, Vimla S.; Ahram, Dina; Vena, Natalie; Bogyo, Kelsie; Bomback, Andrew S.; Radhakrishnan, Jai; Appel, Gerald B.; Ahn, Wooin; Cohen, David Jonathan; Canetta, Pietro A.; Dube, Geoffrey; Rao, Maya K.; Morris, Heather; Crew, Russell J.; Sanna-Cherchi, Simone; Kiryluk, Krzysztof; Gharavi, Ali G.
2020
Articles
GeneticsGenomicsHuman chromosome abnormalities--DiagnosisNephrologyKidneys--Diseases--Genetic aspectsKidneys--Diseases--Treatment

69. Placental Genome and Maternal-Placental Genetic Interactions: A Genome-Wide and Candidate Gene Association Study of Placental Abruption

Denis, Marie; Enquobahrie, Daniel A.; Tadesse, Mahlet G.; Gelaye, Bizu; Sanchez, Sixto E.; Salazar, Manuel; Ananth, Cande V.; Williams, Michelle A.
2014
Articles
Placenta--PhysiologyHaploidyGenomicsGeneticsObstetricsGynecology

70. Polygenic analysis of inflammatory disease variants and effects on microglia in the aging brain

Felsky, Daniel; Patrick, Ellis; Schneider, Julie A.; Mostafavi, Sara; Gaiteri, Chris; Patsopoulos, Nikolaos; Bennett, David A.; De Jager, Philip Lawrence
2018
Articles
GenomicsAlzheimer's diseaseMicrogliaInflammationNervous system--DiseasesNatural immunityNervous system--Degeneration--Molecular aspects

71. Prediction of enzyme function based on 3D templates of evolutionarily important amino acids

Kristensen, David; Ward, R Matthew; Lisewski, Andreas; Erdin, Serkan; Chen, Brian Y; Fofanov, Viacheslav; Kimmel, Marek; Kavraki, Lydia; Lichtarge, Olivier
2008
Articles
GenomicsProteins--StructureBiophysicsMolecular biology

72. Processes and factors involved in decisions regarding return of incidental genomic findings in research

Klitzman, Robert L.; Buquez, Brigitte; Appelbaum, Paul S.; Fyer, Abby; Chung, Wendy K.
2014
Articles
GenomicsMedical ethicsInformed consent (Medical law)

73. Promoter Hypermethylation of FANCF: Disruption of Fanconi Anemia-BRCA Pathway in Cervical Cancer

Narayan, Gopeshwar; Arias-Pulido, Hugo; Nandula, Subhadra; Basso, Katia; Sugirtharaj, Dorcas D.; Vargas, Hernan; Mansukhani, Mahesh M.; Villella, Jeannine; Meyer, Larissa; Schneider, Achim; Gissmann, Lutz; Dürst, Matthias; Pothuri, Bhavana; Vundavalli, Murty V.
2004
Articles
EpigeneticsGenomicsCervix uteri--CancerFanconi's anemiaBRCA genes

74. Quantitative Approaches to the Genomics of Clonal Evolution

Zairis, Sakellarios
2018
Theses
GeneticsBioinformaticsMathematicsGenomicsClones (Plants)Evolution (Biology)

75. Rapid re-identification of human samples using portable DNA sequencing

Zaaijer, Sophie; Gordon, Assaf; Speyer, Daniel; Piccone, Robert; Groen, Simon Cornelis; Erlich, Yaniv
2017
Articles
CytologyGeneticsGenomicsDNA fingerprintingCell linesComputer science

76. Rare variants in SOX17 are associated with pulmonary arterial hypertension with congenital heart disease

Zhu, Na; Welch, Carrie L.; Wang, Jiayao; Allen, Philip M.; Gonzaga-Jauregui, Claudia; Ma, Lijiang; King, Alejandra K.; Krishnan, Usha; Rosenzweig, Erika B.; Ivy, D. Dunbar; Austin, Eric D.; Hamid, Rizwan; Pauciulo, Michael W.; Lutz, Katie A.; Nichols, William C.; Reid, Jeffrey G.; Overton, John D.; Baras, Aris; Dewey, Frederick E.; Shen, Yufeng; Chung, Wendy K.
2018
Articles
Pulmonary hypertensionCongenital heart diseaseExomesGeneticsGenomics

77. Recurrent gross mutations of the PTEN tumor suppressor gene in breast cancers with deficient DSB repair

Saal, Lao H.; Gruvberger-Saal, Sofia K.; Persson, Camilla; Lövgren, Kristina; Jumppanen, Mervi; Staaf, Johan; Jönsson, Göran; Pires, Maira M.; Maurer, Mathew; Holm, Karolina; Koujack, Susan; Subramaniyam, Shivakumar; Vallon-Christersson, Johan; Olsson, Håkan; Su, Tao; Memeo, Lorenzo; Ludwig, Thomas; Ethier, Stephen P.; Krogh, Morton; Szabolcs, Matthias; Vundavalli, Murty V.; Isola, Jorma; Hibshoosh, Hanina; Parsons, Ramon E.; Borg, Åke
2008
Articles
Breast--Cancer--Genetic aspectsBRCA genesOncogenesGenomicsCytogenetics

78. Researchers’ views on informed consent for return of secondary results in genomic research

Appelbaum, Paul S.; Fyer, Abby; Klitzman, Robert L.; Martinez, Josue Natanael; Parens, Erik; Zhang, Yuan; Chung, Wendy K.
2015
Articles
GenomicsGeneticsMedical ethicsInformed consent (Medical law)

79. Researchers’ views on return of incidental genomic research results: qualitative and quantitative findings

Klitzman, Robert L.; Appelbaum, Paul S.; Fyer, Abby; Martinez, Josue Natanael; Buquez, Brigitte; Wynn, Julia; Waldman, Cameron R.; Phelan, Jo C.; Parens, Erik; Chung, Wendy K.
2013
Articles
GenomicsGeneticsMedical ethicsInformed consent (Medical law)

80. Research Participants’ Preferences for Hypothetical Secondary Results from Genomic Research

Wynn, Julia; Martinez, Josue Natanael; Duong, Jimmy; Chiuzan, Codruta; Phelan, Jo C.; Fyer, Abby; Klitzman, Robert L.; Appelbaum, Paul S.; Chung, Wendy K.
2017
Articles
GenomicsMedical ethicsInformed consent (Medical law)

81. Return of Secondary Genomic Findings vs Patient Autonomy: Implications for Medical Care

Klitzman, Robert L.; Appelbaum, Paul S.; Chung, Wendy K.
2013
Articles
GenomicsGeneticsMedical ethicsInformed consent (Medical law)

82. Screening Whole-Genome Sequenced Strains to Investigate Genetic Determinants of Gentle Touch Sensitivity in Caenorhabditis elegans

Lawry, Stephanie Terese
2020
Theses
GeneticsBiologyGenomicsGenomesNematodesTouchNeurosciences

83. Should Life Insurers Have Access to Genetic Test Results?

Klitzman, Robert L.; Appelbaum, Paul S.; Chung, Wendy K.
2014
Articles
GenomicsGeneticsLife insuranceBioethics

84. Single-Molecule Carbon Nanotube Field-Effect Transistors for Genomic Applications

Trocchia, Scott
2018
Theses
Electrical engineeringNanotechnologyField-effect transistorsCarbon nanotubesGenomics

85. Supplemental Data: PLA2G6 Mutations Related to Distinct Phenotypes: A New Case with Early-onset Parkinsonism

Giri, Anamika; Guven, Gamze; Hanagasi, Hasmet; Hauser, Ann-Kathrin; Erginul-Unaltuna, Nihan; Bilgic, Basar; Gurvit, Hakan; Heutink, Peter; Gasser, Thomas; Lohmann, Ebba; Simón-Sánchez, Javier
2016
Data (Information)
DystoniaGenomicsParkinson's diseaseNervous system--DegenerationNeurosciencesGenetics

86. Synonymous site conservation in the HIV-1 genome

Mayrose, Itay; Stern, Adi; Burdelova, Ela; Sabo, Yosef; Laham-Karam, Nihay; Zamostiano, Rachel; Bacharach, Eran; Pupko, Tal
2013
Articles
HIV (Viruses)GenomicsGeneticsBiology

87. The intolerance to functional genetic variation of protein domains predicts the localization of pathogenic mutations within genes

Gussow, Ayal B.; Petrovski, Slave; Wang, Quanli; Allen, Andrew S.; Goldstein, David B.
2016
Articles
Genetic regulationMutation (Biology)TolerationGenomics

88. The Need for Vigilance in the Marketing of Genomic Tests in Psychiatry

Klitzman, Robert L.
2015
Articles
PsychiatryGenomicsBioethics

89. Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea (Eutrema salsugineum)

Lee, Yang; Giorgi, Federico M.; Lohse, Marc; Kvederaviciute, Kotryna; Klages, Sven; Usadel, Björn; Meskiene, Irute; Reinhardt, Richard; Hincha, Dirk
2013
Articles
Plant gene expressionGenomicsMolecular biology

90. Utilizing functional genomics approaches to characterize risk genes in alopecia areata

Erjavec, Stephanie O'Toole
2020
Theses
GeneticsImmunologyAlopecia areataHair--Diseases--Genetic aspectsGenomicsAutoimmune diseases

91. Viral diversity and clonal evolution from unphased genomic data

Khiabanian, Hossein; Carpenter, Zachary; Kugelman, Jeffrey; Chan, Joseph; Trifonov, Vladimir; Nagle, Elyse; Warren, Travis; Iversen, Patrick; Bavari, Sina; Palacios, Gustavo; Rabadan, Raul
2014
Articles
GenomicsCytologyBioinformatics