Subject: Bioinformatics | Search Results

201. Developing Statistical Methods for Incorporating Complexity in Association Studies

: Palmer, Cameron Douglas
: 2017
: Theses
: BioinformaticsHuman genome--ResearchStatisticsGenomics--Statistical methodsResearch--Data processing

202. Discovering new drug-drug interactions using data science: Applications to drug-induced Long QT Syndrome

: Lorberbaum, Tal
: 2017
: Theses
: BioinformaticsPhysiologyPharmacologyDrug interactionsLong QT syndrome

203. Early recognition of multiple sclerosis using natural language processing of the electronic health record

: Chase Jr., Herbert; Mitrani, Lindsey Rebecca; Lu, Gabriel G.; Fulgieri, Dominick J.
: 2017
: Articles
: Medical records--Data processingMultiple sclerosis--DiagnosisMultiple sclerosisBioinformaticsDiagnostic errorsDiagnosis--Computer-assisted instructionNatural language processing (Computer science)

204. Empirical Bayes, Bayes factors and deoxyribonucleic acid fingerprinting

: Basu, Ruma
: 2017
: Theses
: StatisticsDNA fingerprintingBioinformatics

205. Leveraging Knowledge-Based Approaches to Promote Antiretroviral Toxicity Monitoring in Underserved Settings

: Ogallo, William
: 2017
: Theses
: Medical sciencesInformation scienceAntiretroviral agentsToxicity testingBioinformatics

206. Mindboggling morphometry of human brains

: Klein, Arno; Ghosh, Satrajit S.; Bao, Forrest S.; Giard, Joachim; Häme, Yrjö; Stavsky, Eliezer; Lee, Noah; Rossa, Brian; Neto, Elias Chaibub; Keshavan, Anisha; Reuter, Martin
: 2017
: Articles
: Biomedical engineeringImaging systems in biologyBrain--ImagingBioinformatics

207. Molecular Dynamics Simulations of Microtubule-associated protein 1A/1B-light chain 3 (LC3) and its membrane associated form(LC3-II)

: Mathew, Shyno
: 2017
: Theses
: Chemical engineeringMolecular biologyBioinformaticsAutophagic vacuoleMolecular dynamics

208. Orion: Detecting regions of the human non-coding genome that are intolerant to variation using population genetics

: Gussow, Ayal B.; Copeland, Brett; Dhindsa, Ryan; Wang, Quanli; Petrovski, Slave; Majoros, William H.; Allen, Andrew S.; Goldstein, David B.
: 2017
: Articles
: Human genomePopulation geneticsNon-coding RNABioinformaticsGenomics

209. Structure Function Analysis of Drug Resistance Driver Mutations in Acute Lymphoblastic Leukemia

: Carpenter, Zachary Wayne
: 2017
: Theses
: Lymphoblastic leukemia in childrenPediatric hematologyBones--Cancer--TreatmentBone marrow--CancerDrug resistance in cancer cellsLymphoblastic leukemiaBioinformaticsOncologyPharmacology

210. Systematic, network-based characterization of therapeutic target inhibitors

: Shen, Yao; Alvarez, Mariano; Bisikirska, Brygida; Lachmann, Alexander; Realubit, Ronald B.; Pampou, Sergey Yu; Coku, Jorida; Karan Jr., Charles; Califano, Andrea
: 2017
: Articles
: TherapeuticsGene expressionComputational biologyBioinformatics

211. Systems biology approaches to precision medicine

: He, Jing
: 2017
: Theses
: BioinformaticsCytologyComputer scienceSystems biologyMedicine

212. Using interspecies biological networks to guide drug therapy

: Jacunski, Alexandra
: 2017
: Theses
: BioinformaticsCombination drug therapyDrug interactions

213. Adapting and Optimizing CBV-MRI and MEGAPRESS-MRS to Measure Slow Functional Changes in Normal and Abnormal Brains

: Guo, Jia
: 2018
: Theses
: Biomedical engineeringNeurosciencesBioinformaticsBrain--Localization of functionsBrain--ImagingNeurochemistry

214. Analysis of Oncogenic Signal Transduction with Application to KRAS Signaling Pathways

: Broyde, Joshua
: 2018
: Theses
: BioinformaticsBiometryMolecular biologyCancer--Molecular aspectsCellular signal transductionOncology

215. A Single-Cell Immune Map of Normal and Cancerous Breast Reveals an Expansion of Phenotypic States Driven by the Tumor Microenvironment

: Carr, Ambrose James
: 2018
: Theses
: BioinformaticsOncologyComputer scienceImmunologyTumors

216. Attractor Metafeatures and Their Application in Biomolecular Data Analysis

: Ou Yang, Tai-Hsien
: 2018
: Theses
: BioinformaticsElectrical engineeringAttractors (Mathematics)AlgorithmsBiochemical markers

217. Characterization of kinase gene expression and splicing profile in prostate cancer with RNA-Seq data

: Feng, Huijuan; Li, Tingting; Zhang, Xuegong
: 2018
: Articles
: Prostate--CancerGene expressionRNA splicingProtein kinasesGenomicsBioinformatics

218. Characterizing Immune Responses to Marburg Virus Infection in Animal Hosts Using Statistical Transcriptomic Analysis

: Lee, Albert Kim
: 2018
: Theses
: BioinformaticsMarburg virusHost-virus relationshipsVirus diseases--Immunological aspectsImmunology

219. Genomic and machine-learning analysis of germline variants in cancer

: Madubata, Chioma
: 2018
: Theses
: BioinformaticsCytologyGeneticsMachine learningGerm cellsCancer

220. HT-eQTL: integrative expression quantitative trait loci analysis in a large number of human tissues

: Li, Gen; Jima, Dereje; Wright, Fred A.; Nobel, Andrew B.
: 2018
: Articles
: BioinformaticsGene expressionTissues

221. Leveraging patient-provided data to improve understanding of disease risk

: da Graca Polubriaginof, Fernanda Caroline
: 2018
: Theses
: MedicineBioinformaticsMedical sciencesDiseases--Risk factors

222. Life cycle synchronization is a viral drug resistance mechanism

: Neagu, Iulia A.; Olejarz, Jason; Freeman, Mark; Rosenbloom, Daniel I. S.; Nowak, Martin A.; Hill, Alison L.
: 2018
: Articles
: Drug resistanceViruses--EvolutionBioinformaticsComputational biology

223. Optimizing the Collection and Use of Patient-Generated Health Data

: Reading, Meghan J.
: 2018
: Theses
: NursingBioinformaticsMedical recordsHealth services administrationPublic health

224. Pharmacological risk factors associated with hospital readmission rates in a psychiatric cohort identified using prescriptome data mining

: Shameer, Khader; Perez-Rodriguez, M. M.; Bachar, Roy; Li, Li; Johnson, Amy; Johnson, Kipp W.; Glicksberg, Benjamin S.; Smith, Milo R.; Readhead, Ben; Scarpa, Joseph; Jebakaran, Jebakumar; Kovatch, Patricia; Lim, Sabina; Goodman, Wayne; Reich, David L.; Kasarskis, Andrew; Tatonetti, Nicholas P.; Dudley, Joel T.
: 2018
: Articles
: PharmacologyBioinformaticsHospitals--Admission and discharge--Data processingPsychiatric hospital patientsHealth services administration--Data processingBig data

225. Quantitative Approaches to the Genomics of Clonal Evolution

: Zairis, Sakellarios
: 2018
: Theses
: GeneticsBioinformaticsMathematicsGenomicsClones (Plants)Evolution (Biology)

226. Regulation of splicing networks in neurodevelopment

: Weyn-Vanhentenryck, Sabastien Matthieu
: 2018
: Theses
: BioinformaticsNeurosciencesRNA splicingRNA-protein interactions

227. Regulatory logic of cellular diversity in the nervous system

: Closser, Michael Edward
: 2018
: Theses
: Molecular biologyNeurosciencesBioinformaticsNervous systemGene expressionCellular control mechanisms

228. Systematically Mapping the Epigenetic Context Dependence of Transcription Factor Binding

: Kribelbauer, Judith Franziska
: 2018
: Theses
: BiochemistryBioinformaticsBiophysicsTranscription factorsGene regulatory networksEpigenetics

229. The generation and phenotypic effect of human genetic mutations

: Chen, Chen
: 2018
: Theses
: BioinformaticsComputer scienceMutation (Biology)Human genetics--VariationMachine learning

230. Biological Insights from Geometry and Structure of Single-Cell Data

: Sharma, Roshan
: 2019
: Theses
: BioinformaticsMathematicsT cells--DifferentiationGeometrySingle cell proteins

231. Computational Toxinology

: Romano, Joseph Daniel
: 2019
: Theses
: BioinformaticsVenom--Therapeutic useMedical informaticsDrugs--Research

232. Investigating and Supporting Sensemaking within Online Health Communities

: Nakikj, Drashko
: 2019
: Theses
: Information scienceComputer scienceBioinformaticsMedical informaticsOnline social networksMedical sciences

233. Investigating the utility of exome sequencing for kidney disease

: Groopman, Emily
: 2019
: Theses
: GeneticsBioinformaticsMedicineKidneys--DiseasesExomes

234. New Tools for Understanding and Engineering Complex Microbial Communities

: Sheth, Ravi Uday
: 2019
: Theses
: BiologyBioinformaticsMicroorganismsMicrobial ecology--Technique

235. Simulating drug responses in laboratory test time series with deep generative modeling

: Yahi, Alexandre
: 2019
: Theses
: BioinformaticsPharmacologyDecision support systemsMachine learningNeural networks (Computer science)

236. Systems Genetics of DNA Damage Tolerance – Cisplatin, RAD5 & CRISPR-mediated Nonsense

: Bryant, Eric Edward
: 2019
: Theses
: GeneticsBioinformaticsBiology--ClassificationDNA damageCisplatinCRISPR (Genetics)

237. Computational Analysis of Biomolecular Data for Medical Applications from Bulk to Single-cell

: Zhu, Kaiyi
: 2020
: Theses
: Electrical engineeringBioinformaticsNucleotide sequenceDNARNABiomolecules--AnalysisMolecular diagnosis

238. Electronic Health Record-Derived Phenotyping Models to Improve Genomic Research in Stroke

: Thangaraj, Phyllis Mary
: 2020
: Theses
: BioinformaticsGeneticsCerebrovascular diseaseCerebrovascular disease--Risk factorsMedical records--Data processingMachine learning--Industrial applications

239. Generative Models for Synthetic Biology

: Blazejewski, Tomasz
: 2020
: Theses
: BioinformaticsBiology--ClassificationMolecular biologySynthetic biologyMachine learningAmino acid sequence

240. Loop Prediction and Homology Modeling with High Resolution

: Xu, Tianchuan
: 2020
: Theses
: BioinformaticsProteins--Structure--Computer simulationHomology (Biology)Sequence alignment (Bioinformatics)

241. Mosaicism and the genetic architecture of congenital heart disease

: Hsieh, Alexander Lin
: 2020
: Theses
: BioinformaticsGeneticsCongenital heart diseaseMosaicismDiseases--Causes and theories of causation

242. Spatial and genomic analysis of the glioblastoma tumor microenvironment

: Chen, Andrew
: 2020
: Theses
: BiologyBioinformaticsGlioblastoma multiformeBrain--Cancer--ResearchCancer--Immunotherapy--EvaluationMacrophages--Research

243. The autophagosomal perspective: Tissue-specificity and cell-specificity of the autophagic response to starvation in vivo

: Yang, Young Joo
: 2020
: Theses
: Molecular biologyBioinformaticsVeterinary medicineAutophagic vacuoles

244. A Comparative Analysis of Genome Rearrangement in Ciliates

: Feng, Yi
: 2021
: Theses
: BiologyBioinformaticsEvolution (Biology)Gene rearrangementCiliata--GeneticsEuplotesGenetic code

245. Characterizing molecular drivers of clinical outcome in pediatric acute leukemias by systems biology and machine learning

: Alloy, Alexandre Paul
: 2021
: Theses
: BioinformaticsLeukemia--Genetic aspectsLeukemia in childrenMachine learningAcute leukemia

246. Genetic regulatory variant effects across tissues and individuals

: Flynn, Elise Duboscq
: 2021
: Theses
: BioinformaticsMedical geneticsGene expression--ResearchHuman genomeCoronary heart disease--Genetic aspectsCoronary arteriesPhenotype

247. Integration of Functional Genomic Data in Genetic Analysis

: Chen, Siying
: 2021
: Theses
: BioinformaticsMedical genetics--ResearchHuman genomeEpigeneticsAutism spectrum disorders--Genetic aspects

248. Mechanisms Underlying Phenotypic Heterogeneity in Simplex Autism Spectrum Disorders

: Chiang, Andrew Hann
: 2021
: Theses
: GeneticsBiologyBioinformaticsAutism spectrum disorders--Genetic aspectsPhenotypeMutagenesis

249. Metabolic evaluation of genetic and environmental contributors to Alzheimer’s disease

: Kalia, Vrinda
: 2021
: Theses
: Environmental healthBioinformaticsToxicologyAlzheimer's disease--Genetic aspectsCaenorhabditis elegansAfrican AmericansCaribbean AmericansWhite people

250. Methods for modeling the dynamics of microbial communities

: Joseph, Tyler
: 2021
: Theses
: BioinformaticsNucleotide sequenceMicrobiologyBiotic communitiesIrritable colon

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