1. Whole-genome linkage analysis in mapping alcoholism genes using single-nucleotide polymorphisms and microsatellites Wang, Shuang; Huang, Song; Liu, Nianjun; Chen, Liang; Oh, Cheongeun; Zhao, Hongyu 2005 Articles Microsatellites (Genetics)Gene mappingAlcoholism--Genetic aspectsSingle nucleotide polymorphismsBiometryBioinformaticsGenetics
2. Whole-genome association studies on alcoholism comparing different phenotypes using single-nucleotide polymorphisms and microsatellites Chen, Liang; Liu, Nianjun; Wang, Shuang; Oh, Cheongeun; Carriero, Nicholas; Zhao, Hongyu 2005 Articles Microsatellites (Genetics)Alcoholism--Genetic aspectsGenetic polymorphismsGeneticsBiometryMedicine
3. Whole-genome association analysis to identify markers associated with recombination rates using single-nucleotide polymorphisms and microsatellites Huang, Song; Wang, Shuang; Liu, Nianjun; Chen, Liang; Oh, Cheongeun; Zhao, Hongyu 2005 Articles Single nucleotide polymorphismsMicrosatellites (Genetics)Gene mappingGenetic recombination--ResearchGeneticsBiometry
4. Transcription activity hot spot, is it real or an artifact? Wang, Shuang; Zheng, Tian; Wang, Yuanjia 2007 Articles GeneticsBiometry
5. Statistical Methods for Genetic Studies with Family History of Diseases Lee, Annie Jehe 2019 Theses BiometryStatisticsGeneticsFamilial diseasesEpidemiology
6. Small sample properties of rare variant analysis methods Swartz, Michael; Kim, Taebeom; Niu, Jiangong; Yu, Robert; Shete, Sanjay; Ionita-Laza, Iuliana 2014 Articles Human genetics--VariationBiometryGenetics
7. Single-trait and multi-trait genome-wide association analyses identify novel loci for blood pressure in African-ancestry populations Liang, Jingjing; Le, Thu H.; Velez Edwards, Digna R.; Tayo, Bamidele O.; Gaulton, Kyle J.; Smith, Jennifer A.; Lu, Yingchang; Jensen, Richard A.; Chen, Guanjie; Yanek, Lisa R.; Schwander, Karen; Tajuddin, Salman M.; Sofer, Tamar; Kim, Wonji; Kayima, James; McKenzie, Colin A.; Fox, Ervin; Nalls, Michael A.; Young, J. Hunter; Sun, Yan V.; Lane, Jacqueline M.; Cechova, Sylvia; Zhou, Jie; Tang, Hua; Fornage, Myriam; Musani, Solomon K.; Wang, Heming; Lee, Juyoung; Adeyemo, Adebowale; Dreisbach, Albert W.; Forrester, Terrence; Chu, Pei-Lun; Cappola, Anne R.; Evans, Michele K.; Morrison, Alanna C.; Martin, Lisa W.; Wiggins, Kerri L.; Hui, Qin; Zhao, Wei; Jackson, Rebecca D.; Ware, Erin B.; Faul, Jessica D.; Reiner, Alex P.; Bray, Michael; Denny, Joshua C.; Mosley, Thomas H.; Palmas, Walter R.; Guo, Xiuqing; Papanicolaou, George J.; Penman, Alan D.; Polak, Joseph F.; Rice, Kenneth; Taylor, Ken D.; Boerwinkle, Eric; Bottinger, Erwin P.; Liu, Kiang; Risch, Neil; Hunt, Steven C.; Kooperberg, Charles; Zonderman, Alan B.; Laurie, Cathy C.; Becker, Diane M.; Cai, Jianwen; Loos, Ruth J. F.; Psaty, Bruce M.; Weir, David R.; Kardia, Sharon L. R.; Arnett, Donna K.; Won, Sungho; Edwards, Todd L.; Redline, Susan; Cooper, Richard; Rao, D. C.; Rotter, Jerome I.; Rotimi, Charles N.; Levy, Daniel; Chakravarti, Aravinda; Zhu, Xiaofeng; Franceschini, Nora 2017 Articles EpidemiologyBiometryGeneticsHypertensionAfrican Americans
8. Selecting informative genes for discriminant analysis using multigene expression profiles. Yan, Xin; Zheng, Tian 2008 Articles BiometryGenetics
9. SAVI: a statistical algorithm for variant frequency identification Trifonov, Vladimir; Pasqualucci, Laura; Tiacci, Enrico; Falini, Brunangelo; Rabadan, Raul 2013 Articles Bayesian statistical decision theorySequence alignment (Bioinformatics)Gene frequency--Statistical methodsGeneticsBioinformaticsBiometry
10. Rheumatoid arthritis-associated gene-gene interaction network for rheumatoid arthritis candidate genes Zheng, Tian; Qiao, Bo; Lo, Shaw-Hwa; Xie, Jun; Huang, Chien-Hsun; Cong, Lei 2009 Articles BiometryGenetics
11. Refinement of primate copy number variation hotspots identifies candidate genomic regions evolving under positive selection Lee, Charles; Johnson, Welkin; Clark, Andrew; Vallender, Eric; Babb, Paul; Iskow, Rebecca; Zhu, Qihui; Shi, Xinghua; Mills, Ryan; Ionita-Laza, Iuliana; Gokcumen, Omer 2011 Articles GeneticsBiometry
12. Recessive genetic mode of an ADH4 variant in substance dependence in African-Americans: A model of utility of the HWD test Luo, Xingguang; Zuo, Lingjun; Kranzler, Henry; Wang, Shuang; Anton, Raymond; Gelernter, Joel 2008 Articles GeneticsBiometry
13. Rare Variant Analysis for Family-Based Design De, Gourab; Yip, Wai-Ki; Ionita-Laza, Iuliana; Laird, Nan 2013 Articles BiometryGenetics
14. Probing genetic overlap among complex human phenotypes Rzhetsky, Andrey; Wajngurt, David; Park, Naeun; Zheng, Tian 2006 Articles BiometryGenetics
15. Pattern-based mining strategy to detect multi-locus association and gene × environment interaction Li, Zhong; Zheng, Tian; Califano, Andrea; Floratos, Aristidis 2007 Articles GeneticsBiometry
16. PAGE: Parametric Analysis of Gene Set Enrichment Kim, Seon-Young; Volsky, David Julian 2005 Articles Bioinformatics--MethodologyStatisticsDNA microarrays--Data processingBioinformaticsGeneticsBiometry
17. Maximum-parsimony haplotype frequencies inference based on a joint constrained sparse representation of pooled DNA Jajamovich, Guido H.; Iliadis, Alexandros; Anastassiou, Dimitris; Wang, Xiaodong 2013 Articles BiometryDNA--Data processingGenetics—ResearchBioinformaticsGeneticsBiology
18. Joint study of genetic regulators for expression traits related to breast cancer Zheng, Tian; Wang, Shuang; Cong, Lei; Ding, Yuejing; Ionita-Laza, Iuliana; Lo, Shaw-Hwa 2007 Articles GeneticsBiometryBreast--Cancer--Genetic aspects
19. Implications for health and disease in the genetic signature of the Ashkenazi Jewish population Guha, Saurav; Rosenfeld, Jeffrey; Malhotra, Anil; Gregersen, Peter; Kane, John; Pe'er, Itsik; Darvasi, Ariel; Lencz, Todd 2012 Articles GeneticsBiometry
20. Identifying rare disease variants in the Genetic Analysis Workshop 17 simulated data: a comparison of several statistical approaches Fan, Ruixue; Huang, Chien-Hsun; Lo, Shaw-Hwa; Zheng, Tian; Ionita-Laza, Iuliana 2011 Articles GeneticsBiometry
21. Identifying influential regions in extremely rare variants using a fixed-bin approach Agne, Michael; Huang, Chien-Hsun; Hu, Inchi; Wang, Haitian; Zheng, Tian; Lo, Shaw-Hwa 2011 Articles GeneticsBiometry
22. Identification of Rare Causal Variants in Sequence-Based Studies: Methods and Applications to VPS13B, a Gene Involved in Cohen Syndrome and Autism Ionita-Laza, Iuliana; Capanu, Marinela; De Rubeis, Silvia; McCallum, Kenneth; Buxbaum, Joseph D. 2014 Articles Genetic disordersHuman genetics--VariationAutismGeneticsBiometry
23. Identification of gene interactions associated with disease from gene expression data using synergy networks Watkinson, John; Wang, Xiaodong; Zheng, Tian; Anastassiou, Dimitris 2008 Articles GeneticsBiometry
24. Haplotype Inference through Sequential Monte Carlo Iliadis, Alexandros 2013 Theses BiometryEngineeringGenetics
25. Genome-wide gene-based analysis of rheumatoid arthritis-associated interaction with PTPN22 and HLA-DRB1 Lo, Shaw-Hwa; Chong, Lei; Xie, Jun; Huang, Chien Hsun; Qiao, Bo; Zheng, Tian 2009 Articles GeneticsBiometry
26. Genetic-linkage mapping of complex hereditary disorders to a whole-genome molecular-interaction network Iossifov, Ivan; Zheng, Tian; Baron, Miron; Gilliam, T. Conrad; Rzhetsky, Andrey 2008 Articles BiometryGenetics
27. Generalization of DNA microarray dispersion properties: microarray equivalent of t-distribution Novak, Jaroslav; Kim, Seon-Young; Xu, Jun; Modlich, Olga; Volsky, David Julian; Honys, David; Slonczewski, Joan; Bell, Douglas; Blattner, Fred; Blumwald, Eduardo; Boerma, Marjan; Cosio, Manuel; Gatalica, Zoran; Hajduch, Marian; Hidalgo, Juan; McInnes, Roderick; Miller III, Merrill; Penkowa, Milena; Rolph, Michael; Sottosanto, Jordan; St-Arnaud, Rene; Szego, Michael; Twell, David; Wang, Charles 2006 Articles Gene expression--Mathematical modelsGene expression--Data processingBiometryDNA microarrays--Statistical methodsGenetics
28. Discovering pure gene-environment interactions in blood pressure genome-wide association studies data: a two-step approach incorporating new statistics Wang, Maggie Haitan; Huang, Chien-Hsun; Zheng, Tian; Lo, Shaw-Hwa; Hu, Inchi 2014 Articles GeneticsBiometry
29. Discovering interactions among BRCA1 and other candidate genes associated with sporadic breast cancer Lo, Shaw-Hwa; Chernoff, Herman; Cong, Lei; Ding, Yuejing; Zheng, Tian 2008 Articles BiometryGenetics
30. Diagnostic odyssey of patients with mitochondrial disease: Results of a survey Grier, Johnston; Hirano, Michio; Karaa, Amel; Shepard, Emma; Thompson, John L. 2018 Articles NeurologyGeneticsMitochondrial pathologyBiometry
31. Correlation between quantitative traits and correlation between corresponding LOD scores: detection of pleiotropic effects Ulgen, Ayse; Han, Zhihua; Li, Wentian 2003 Articles GeneticsBiometry
32. Construction of the model for the Genetic Analysis Workshop 14 simulated data... Greenberg, David; Zhang, Junying; Shmulewitz, Dvora; Strug, Lisa J.; Zimmerman, Regina; Singh, Veena; Marathe, Sudhir 2005 Articles Gene mappingGenetics--Data processingLinkage (Genetics)BiometryGenetics
33. Constructing gene association networks for rheumatoid arthritis using the backward genotype-trait association (BGTA) algorithm Ding, Yuejing; Cong, Lei; Ionita-Laza, Iuliana; Lo, Shaw-Hwa; Zheng, Tian 2007 Articles GeneticsBiometry
34. Considering interactive effects in the identification of influential regions with extremely rare variants via fixed bin approach Agne, Michael; Huang, Chien-Hsun; Hu, Inchi; Wang, Haitian; Zheng, Tian; Lo, Shaw-Hwa 2014 Articles GeneticsBiometry
35. Comparison of single-nucleotide polymorphisms and microsatellites in inference of population structure Liu, Nianjun; Chen, Liang; Wang, Shuang; Oh, Cheongeun; Zhao, Hongyu 2005 Articles Microsatellites (Genetics)Human population genetics--ResearchSingle nucleotide polymorphismsBiometryGeneticsDemography
36. Comparing the power of family-based association tests for sequence data with applications in the GAW18 simulated data Huang, Jing; Chen, Yong; Swartz, Michael; Ionita-Laza, Iuliana 2014 Articles Human genetics--VariationBiometryGenetics
37. Combining identity by descent and association in genetic case-control studies Zhang, Qingrun; Wang, Shuang; Ott, Jurg 2008 Articles GeneticsBiometry
38. Clustering and principal-components approach based on heritability for mapping multiple gene expressions Wang, Yuanjia; Fang, Yixin; Wang, Shuang 2007 Articles PhenotypeGene expressionBiometryGenetics
39. Bayesian hierarchical graph-structured model for pathway analysis using gene expression data Zhou, Hui; Zheng, Tian 2013 Articles BiometryGenetics
40. Backward Haplotype Transmission Association (BHTA) Algorithm-A Fast Multiple-Marker Screening Method Lo, Shaw-Hwa; Zheng, Tian 2002 Articles BiometryGenetics
41. Backward Genotype-Trait Association (BGTA)-Based Dissection of Complex Traits in Case-Control Designs Zheng, Tian; Wang, Hui; Lo, Shaw-Hwa 2006 Articles StatisticsGeneticsBiometry
42. Association screening for genes with multiple potentially rare variants: an inverse-probability weighted clustering approach Liu, Ying; Huang, Chien-Hsun; Hu, Inchi; Zheng, Tian; Lo, Shaw-Hwa 2011 Articles GeneticsBiometry
43. Association analysis of complex diseases using triads, parent-child dyads and singleton monads Fan, Ruzong; Lee, Annie Jehe; Lu, Zhaohui; Liu, Aiyi; Troendle, James; Mills, James 2013 Articles Medical geneticsGenetic markersFamilial diseasesAssociation schemes (Combinatorial analysis)MedicineBiometryGenetics
44. A Simple Test of Class-Level Genetic Association Can Reveal Novel Cardiometabolic Trait Loci Qian, Jing; Nunez, Sara; Reed, Eric; Reilly, Muredach Patrick; Foulkes, Andrea S. 2016 Articles EigenvaluesGenomicsMedical geneticsMeta-analysisGeneticsBiometryMicrobiology
45. Apolipoprotein M Gene (APOM) Polymorphism Modifies Metabolic and Disease Traits in Type 2 Diabetes Zhou, Jun-Wei; Tsui, Stephen K. W.; Ng, Maggie C. Y.; Geng, Hua; Li, Sai-Kam; So, Wing-Yee; Ma, Ronald C.; Wang, Ying; Tao, Qian; Chen, Zhen-Yu; Chan, Juliana C. N.; Ho, Yuan-Yuan 2011 Articles GeneticsBiometry
46. APOE Genotype-Function Relationship: Evidence of −491 A/T Promoter Polymorphism Modifying Transcription Control but Not Type 2 Diabetes Risk Geng, Hua; Law, Peggy P. Y.; Ng, Maggie C. Y.; Li, Ting; Liang, Li-Yun; Ge, Tiang-Fang; Wong, Kam-Bo; Liang, Chun; Ma, Ronald C.; So, Wing-Yee; Chan, Juliana C. N.; Ho, Yuan-Yuan 2011 Articles BiometryGenetics
47. A partition-based approach to identify gene-environment interactions in genome wide association studies Fan, Ruixue; Huang, Chien-Hsun; Hu, Inchi; Wang, Haitan; Zheng, Tian; Lo, Shaw-Hwa 2014 Articles GeneticsBiometry
48. A note on QTL detecting for censored traits Fang, Yixin 2006 Articles Censored observations (Statistics)Genetics--Mathematical modelsGeneticsBiometry
49. A New Estimating Equation Based Approach for Secondary Trait Analyses in Genetic Case-control Studies Song, Xiaoyu 2015 Theses BiometryGeneticsCase-control methodGeneralized estimating equations
50. Analysis of genome-wide association data by large-scale Bayesian logistic regression Wang, Yuanjia; Sha, Nanshi; Fang, Yixin 2009 Articles GeneticsBiometry
51. A dual-clustering framework for association screening with whole genome sequencing data and longitudinal traits Lui, Ying; Huang, Chien-Hsun; Hu, Inchi; Zheng, Tian; Lo, Shaw-Hwa 2014 Articles GeneticsBiometry
52. A demonstration and findings of a statistical approach through reanalysis of inflammatory bowel disease data Lo, Shaw-Hwa; Zheng, Tian 2004 Articles BiometryGenetics
53. A Bayesian genome screening of maximum number of drinks as an alcoholism phenotype with the new Haseman-Elston method Oh, Cheongeun; Wang, Shuang; Liu, Nianjun; Chen, Liang; Zhao, Hongyu 2005 Articles Bayesian statistical decision theory--Data processingHuman gene mappingLinkage (Genetics)Alcoholism--Genetic aspectsGeneticsBiometryMedical sciences