1. Genomic and machine-learning analysis of germline variants in cancer Madubata, Chioma 2018 Theses BioinformaticsCytologyGeneticsMachine learningGerm cellsCancer
2. Systems biology approaches to precision medicine He, Jing 2017 Theses BioinformaticsCytologyComputer scienceSystems biologyMedicine
3. Viral diversity and clonal evolution from unphased genomic data Khiabanian, Hossein; Carpenter, Zachary; Kugelman, Jeffrey; Chan, Joseph; Trifonov, Vladimir; Nagle, Elyse; Warren, Travis; Iversen, Patrick; Bavari, Sina; Palacios, Gustavo; Rabadan, Raul 2014 Articles GenomicsCytologyBioinformatics
4. Analyzing Genomic Studies and a Screen for Genes that Suppress Information Loss During DNA Damage Repair Pierce, Steven 2013 Theses BiologyCytologyBioinformatics
5. Extracting Three-Dimensional Orientation and Tractography of Myofibers Using Optical Coherence Tomography Gan, Yu; Fleming, Christine P. 2013 Articles CytologyDiagnostic imagingBioinformatics
6. MutComFocal: an integrative approach to identifying recurrent and focal genomic alterations in tumor samples Rabadan, Raul; Trifonov, Vladimir; Pasqualucci, Laura; Favera, Riccardo Dalla 2013 Articles BioinformaticsCytology
7. Detection of mitochondrial insertions in the nucleus (NuMts) of Pleistocene and modern muskoxen Kolokotronis, Sergios-Orestis; MacPhee, Ross; Greenwood, Alex D. 2007 Articles Evolution (Biology)DNA--ResearchMitochondrial DNABioinformaticsCytology
8. Requirements and ontology for a G protein-coupled receptor oligomerization knowledge base Skrabanek, Lucy; Murcia, Marta; Bouvier, Michel; Devi, Lakshmi; George, Susan; Lohse, Martin; Milligan, Graeme; Neubig, Richard; Palczewski, Krzysztof; Parmentier, Marc; Pin, Jean-Philippe; Vriend, Gerrit; Javitch, Jonathan A.; Campagne, Fabien; Filizola, Marta 2007 Articles OligomerizationCell receptorsBioinformaticsCytology
9. ARACNE: An Algorithm for the Reconstruction of Gene Regulatory Networks in a Mammalian Cellular Context Margolin, Adam A.; Nemenman, Ilya; Basso, Katia; Wiggins, Chris H.; Stolovitzky, Gustavo Alejandro; Favera, Riccardo Dalla; Califano, Andrea 2006 Articles BioinformaticsCytology
10. BioArray Software Environment (BASE): a platform for comprehensive management and analysis of microarray data Saal, Lao H.; Troein, Carl; Vallon-Christersson, Johan; Gruvberger, Sofia; Borg, Åke; Peterson, Carsten 2002 Articles BioinformaticsDNA microarraysCytologyGenetics