1. A symmetry breaking process proposes non-coding functions for olfactory receptor mRNAs. Pourmorady, Ariel David 2024 Theses BiologySmellOlfactory receptor genesEpitheliumGene expressionAllelomorphism
2. Characterizing the secretome of adipose tissue in metabolic stress Goodman, Joshua 2024 Theses BiologyAdipose tissuesObesityBody weight--RegulationMitochondriaParabiosis
3. Circulating Cell-Free Mitochondrial DNA: A Biomarker of Psychobiological Stress Michelson, Jeremy 2024 Theses BiologyMitochondrial DNABiochemical markersPsychobiologyStress (Psychology)--Health aspects
4. Deciphering the Roles of Nuclear Envelope Proteins Associated with Emery-Dreifuss Muscular Dystrophy in the Heart Jin, Qi 2024 Theses CytologyBiologyPathologyMuscular dystrophyHeart--DiseasesMyocardium--DiseasesHeart cellsNuclear membranesMembrane proteins
5. Elucidating the Regulation of Pancreatic Acinar to Ductal Metaplasia Li, Alina Lin 2024 Theses OncologyBiologyPancreatic acinar cells--CancerPancreas--Cancer--ResearchPancreatitis
6. Exploring the effects of dietary fatty acids and iron on modulating sensitivity of lymphomas to ferroptosis Ahmed, Eman Riaz 2024 Theses BiologyLymphomasFatty acidsPhospholipidsPeroxidationImidazolesIron
7. Investigating mechanisms of behavior in Drosophila melanogaster Tener, Samantha Jill 2024 Theses BiologyDrosophila melanogaster--GeneticsAutism spectrum disorders--Genetic aspectsNeuroglia
8. Mammalian translation termination intermediates captured using PDMS microfluidics-based time-resolved cryo-EM (TRCEM) Dadhwal, Prikshat 2024 Theses BiologyBiochemistryBiophysicsEukaryotic cells--GeneticsGenetic translationRibosomesSilicaCryoelectronics
9. Mechanisms of Transformation in T-Cell Lymphomas: Identification of Therapeutic Targets Shih, Bobby Ben 2024 Theses BiologyOncologyLymphomas--TreatmentT cellsMacrophages--ResearchKiller cells
10. Replication stress in activated human NK cells induces sensitivity to apoptosis Guilz, Nicole 2024 Theses BiologyImmunologyKiller cellsApoptosisDiseasesDNA helicases
11. Spatial and Functional Genomic Profiling of Cell States Gu, Ruoyu 2024 Theses BiologyGenomesRNAOxytrichidaeDNA damageDNA repair
12. Spike transmission failures in axons from mouse cortical pyramidal neurons in vivo - raw data Ofer, Netanel; Yuste, Rafael; Cornejo Corona, Victor Hugo 2024 Data (Information) AxonsNeuronsCerebral cortexNeurosciencesBiology
13. The evolution of meiotic recombination in vertebrates: the case of snakes Hoge, Carla R. 2024 Theses BiologyCorn snakeDNA-binding proteinsGeneticsVertebrates
14. The vaginal ecosystem in preterm birth and preeclampsia Kindschuh, William Francis 2024 Theses BiologyObstetricsPremature infantsPremature laborPreeclampsiaVagina--DiseasesAfrican American women--Health and hygieneMicrobiome
15. Cellular arrangement in Pseudomonas aeruginosa biofilms Dayton, Hannah Teckla 2023 Theses BiologyPseudomonas aeruginosaBiofilmsDrug resistance in microorganisms
16. Comparative analysis of nuclear proteomes and strain-specific chromosomes in Oxytricha trifallax Lu, Michael 2023 Theses BiologyCiliata--GeneticsGenomesProteomicsChromosomes
17. Discovery and Optimization of Novel Small-Molecule Inhibitors of Glutathione Peroxidase 4 Lin, Annie 2023 Theses BiologyDrug resistance in cancer cellsCell deathGlutathioneCancer cells--Effect of drugs on
18. Engineering Formate Dehydrogenase Enzymatic Activity for Non-Canonical Cofactors Through Rational Design Vainstein, Salomon 2023 Theses Chemical engineeringBiologyCytologyEnzymesComputational chemistryDehydrogenasesNAD (Coenzyme)
19. Engineering G-Protein Coupled Receptor-Based Living Yeast Diagnostics for Infectious Diseases Rios, Davida Marie 2023 Theses ChemistryBiologyCommunicable diseases--DiagnosisYeast fungi--BiotechnologyAmino acidsCandidiasis
20. Exploring a non-canonical mode of gene regulation mediated by mRNA transcript isoform switching in the context of mammalian development Keskin, Abdurrahman 2023 Theses BiologyEmbryonic stem cellsGene expressionMammals--GeneticsMammals--Development
21. Genetic Variant Effects on Transcription Factor Regulation Li, Xiaoting 2023 Theses BiologyHuman genetics--VariationDiseases--Risk factorsHuman genomeGenomicsGenetic transcriptionGene expression
22. High-throughput methods to investigate the function and pharmacological inhibition of viral proteases Hong, Seo Jung 2023 Theses VirologyBiologyCOVID-19 (Disease)Protease inhibitors
23. Identifying Critical Regulatory Elements of Alternative Splicing Recinos, Yocelyn 2023 Theses BiologyMolecular biologyGenetic engineeringRNA splicingExons (Genetics)Mammals--Genetics
24. Mechanisms involved in the renewal and expansion of hematopoietic stem cells Garyn, Corey Michael 2023 Theses CytologyBiologyBiomedical engineeringHematopoietic stem cellsHematopoiesisBone marrow cellsCell proliferationCalcium
25. Population genetic models of mutation rate evolution and adaptation and the impact of essential workers in the context of social distancing for epidemic control Milligan, William Robert 2023 Theses BiologyEvolution (Biology)MutagenesisGerm cellsSocial distancing (Public health)Epidemics--PreventionEpidemiologyAllelomorphismIndustrial hygiene
26. Regulation of EGFR signal transduction and cell division in quiescent Vulval Precursor Cells during dauer developmental arrest O'Keeffe, Catherine 2023 Theses BiologyDevelopmental biologyCaenorhabditis elegansStem cellsVulvaCell division
27. Regulation of redox metabolism in Pseudomonas aeruginosa biofilms Smiley, Marina K. 2023 Theses MicrobiologyBiologyPseudomonas aeruginosaBiofilmsBacteriaDenitrificationPhenazineAnti-infective agents
28. Rie1 and Sgn1 form an RNA-binding complex that enforces the meiotic entry cell fate decision Gaspary, Alec 2023 Theses BiologyCytologyMolecular biologyYeast--GeneticsSaccharomyces cerevisiae--Genetic aspectsRNA-protein interactionsMeiosis
29. Structural and Functional Studies of CNG channels Hu, Zhengshan 2023 Theses BiologyBiochemistryBiophysicsCyclic nucleotides--AnalysisIon channelsCryoelectronicsElectron microscopy
30. Studies on Eukaryotic Pre-mRNA 3'-End Processing: Insights into PAS Recognition and the U7 snRNP activity Gutierrez Tamayo, Pedro A. 2023 Theses BiologyBiochemical geneticsBiophysicsEukaryotic cells--GeneticsMessenger RNAVertebratesMammals--Molecular genetics
31. The Major Histocompatibility Complex Class I in the Pathogenesis of B-Cell Lymphomas Gomez, Karen 2023 Theses BiologyCarcinogenesisLymphomasHistocompatibilityEpstein-Barr virusCancer--Immunological aspects
32. The Role of Kinesins in Cell Fate Determination During Neurogenesis Helmer, Paige 2023 Theses BiologyKinesinNeurogeneticsNeuronsBrain--PhysiologyMammals--Nervous systemNeuroglia
33. Widespread 3D genome reorganization precedes programmed DNA rearrangement in Oxytricha trifallax Villano, Danylo Julian 2023 Theses BiologyMolecular biologyGeneticsGenomesCiliataRNAGene rearrangement
34. ARP2/3- and resection-coupled genome reorganization into repair domains facilitates chromosome translocations Zagelbaum, Jennifer 2022 Theses BiologyGenomesDNA repairChromosomesPolymerizationChromatinTranslocation (Genetics)
35. Auditory Tuning in Vocal Learning Songbirds Yeh, Yow-Tyng 2022 Theses BiologyNeurosciencesSongbirdsBirds--VocalizationBirdsongsSensorimotor cortex
36. Autophagy and Hematopoietic Stem Cell Potential During Aging Dellorusso, Paul Vincent 2022 Theses BiologyGeneticsImmunologyAutophagic vacuolesHematopoietic stem cells--Therapeutic useCells--AgingGlucose--Metabolism
37. Cardiomyopathy at the Intersection of Stem Cells and Tissue Engineering Wang, Bryan Zicheng 2022 Theses BiologyMyocardium--DiseasesStem cellsGene editingTissue engineeringHeart--Diseases--Genetic aspects
38. Developing and applying novel imaging methods for human diseases Bekdash, Ramsey Azeez 2022 Theses Molecular biologyBiologyFluorescence microscopyElectrophysiologyDiagnostic imagingCOVID-19 (Disease)--TreatmentMetabolism
39. Development of genetically intact bioengineered spores of Bacillus subtilis Flores Quijano, Juan Manuel de Jesus 2022 Theses BiologyBacillus subtilis--GeneticsPlasmids--GeneticsBiotechnologyNatural pesticidesProbiotics
40. Expression and Functional Analyses of the Entire Cadherin Gene Family in C. elegans Majeed, Maryam 2022 Theses BiologyNeurosciencesCaenorhabditis elegans--GeneticsGene expressionCadherins
41. Investigating the Role of TM6SF2 in Lipid Metabolism Gibeley, Sarah B. 2022 Theses BiologyCytologyNutritionLipids--MetabolismLiver--DiseasesHyperlipidemiaGene editing
42. Investigation of Novel lincRNAs SIMALR and RP11-184M15.1 Functions in Inflammatory and Resolving Human Macrophage Cynn, Esther 2022 Theses BiologyMacrophagesApoptosisCardiovascular system--DiseasesMonocytes
43. Investigation of Novel LncRNAs Harboring Risk SNPs Associated with Celiac and Crohn's Disease Shearer, Alyssa 2022 Theses ImmunologyBiologyNon-coding RNAMacrophagesInflammation--Immunological aspects
44. Multiplexed high-throughput screening identifies broadly active rescuers of proteotoxicity Resnick, Samuel Jackson 2022 Theses BiologyAmyotrophic lateral sclerosisNervous system--DegenerationCOVID-19 (Disease)DementiaProtein folding
45. Scouring genomes and evolutionary trees for the origins of sex-biased germline mutation Wu, Felix 2022 Theses BiologyMutagenesisMammals--GeneticsBaboonsSex chromosomesCell divisionSpermatogenesis
46. Single-cell activity and network properties of dorsal raphe serotonin neurons during emotional behaviors Paquelet, Grace Elizabeth 2022 Theses NeurosciencesBiologyMammals--Nervous systemSerotoninEmotionsSerotoninergic mechanisms
47. Systems-Level Approaches to Understanding Protein Synthesis Metz, Jordan Benjamin 2022 Theses BiologyComputer scienceBioinformaticsNucleotide sequenceRibosomesProteins--Synthesis--RegulationRNA-protein interactionsAnimal models in research
48. The contribution of 14-3-3 proteins to protein aggregate homeostasis Herod, Sarah Grace 2022 Theses GeneticsBiologyAmyloidAlzheimer's disease--EtiologyParkinson's diseaseNervous system--DegenerationMeiosisRNA-protein interactions
49. The development and application of high-throughput tools for functional genomics Sheng, Jiemin 2022 Theses BiologyGenomicsNucleotide sequenceDNARNAProteins
50. The Role of Pparg in Urothelial Carinoma Xiang, Ting Wei 2022 Theses BiologyBladder--Cancer--TreatmentRosiglitazoneTretinoin
51. Towards new approaches for studying personalized gut microbiota and host-microbe interactions Huang, Yiming 2022 Theses BiologyBacteriaGastrointestinal system--MicrobiologyBacterial genetics
52. Understanding and Engineering Multicomponent Living Systems: Examples from Synthetic Genomics and Engineered Living Materials McBee, Andrew Ross MacKay 2022 Theses BiologySynthetic biologyGenomicsMetazoaAmino acidsValineMycelium
53. A Comparative Analysis of Genome Rearrangement in Ciliates Feng, Yi 2021 Theses BiologyBioinformaticsEvolution (Biology)Gene rearrangementCiliata--GeneticsEuplotesGenetic code
54. Adipocyte-specific Tribbles-1 Regulates Plasma Adiponectin and Lipoprotein Metabolism in Mice Ha, Elizabeth 2021 Theses BiologyLipoproteinsMiceCoronary heart diseaseBlood lipidsGenes
55. Broad-scale variation in human genetic diversity levels is predicted by purifying selection on coding and non-coding elements Murphy, David 2021 Theses GeneticsEvolution (Biology)BiologyHuman genomeBiodiversity
56. Computational Framework for the Identification of Neural Circuits Underlying Psychiatric Disorders Chang, Jonathan 2021 Theses NeurosciencesComputer scienceBiologyAutism spectrum disordersMutation (Biology)Basal ganglia--DiseasesLimbic system--Diseases
57. Disentangling mutation and selection in human genetic variation: promises and pitfalls Agarwal, Ipsita 2021 Theses BiologyGeneticsEvolution (Biology)Mutation (Biology)Human genomeExomes
58. Electromechanical Coupling in Cells and Its Effects on Membrane Tension and Conductance Jones Molina, John Anthony 2021 Theses BiophysicsCytologyBiologyCell membranes
59. Framework for Mapping Gene Regulation via Single-cell Genetic Screens Tan, Xiangtian 2021 Theses BiologyCytologyGenetic transcription--RegulationCancer cellsProteins--Analysis
60. Function and Regulation of ALS/FTD-associated RNA Binding Protein FUS Tsai, Yueh-Lin 2021 Theses BiologyCytologyMolecular biologyRNA-protein interactionsAmyotrophic lateral sclerosisDementia
61. Mechanisms Underlying Phenotypic Heterogeneity in Simplex Autism Spectrum Disorders Chiang, Andrew Hann 2021 Theses GeneticsBiologyBioinformaticsAutism spectrum disorders--Genetic aspectsPhenotypeMutagenesis
62. “Message in a Bottle”: Extracellular Vesicle microRNAs as Novel Biomarkers of Environmental Exposures and Health Outcomes Comfort, Nicole 2021 Theses Environmental healthBiologyEpidemiologyMicroRNAAsthma in childrenAsthma--Environmental aspectsCity childrenNucleotide sequenceSaliva--Analysis
63. Modeling Gene Therapy for Intractable Developmental and Epileptic Encephalopathy Aimiuwu, Osasumwen Virginia 2021 Theses BiologyEpilepsy--Genetic aspectsMutagenesisBrain--Diseases--TreatmentMice--GeneticsGene therapy
64. Mutagenic Repair Outcomes of DNA Double-Strand Breaks Al-Zain, Amr M. 2021 Theses BiologyMolecular biologyDouble-stranded RNACancer--EtiologyCancer--Genetic aspectsGenomesMutagenesis
65. Neural circuit control of feature tuning in CA1 during spatial learning Rolotti, Sebastian Victor 2021 Theses NeurosciencesBiologyNeurology--ResearchMemory--ResearchHippocampus (Brain)Calcium imagingElectrophysiologyOptogenetics
66. Novel Functions for Dynein Adaptor RILP in Neuronal Autophagy Khobrekar, Noopur V. 2021 Theses BiologyNeurobiologyBiochemistryDyneinAutophagic vacuolesCell organelles
67. Regulation of heterochromatin formation by the JmjC-domain protein Epe1 Bao, Kehan 2021 Theses BiologyEukaryotic cells--GeneticsHeterochromatinChromatinDNA
68. Role of Mu-Opioid Receptors in the Behavioral Effects of the Antidepressant Tianeptine Han, Jaena 2021 Theses BiologyNeurosciencesDepression, Mental--TreatmentAntidepressantsSerotonin uptake inhibitorsMice
69. Roles of Retinoid Signaling in Urothelial Progenitor Cells Wiessner, Gregory 2021 Theses Developmental biologyBiologyEpithelium--PhysiologyBladder
70. RyR1-related myopathy mutations in ATP and calcium binding sites impair channel regulation Yuan, Qi; Dridi, Haikel; Clarke, Oliver B.; Reiken, Steven; Melville, Zephan; Wronska, Anetta; Kushnir, Alexander; Zalk, Ran; Sittenfeld, Leah; Marks, Andrew R. 2021 Articles Muscles--DiseasesCytologyBiology
71. Stress and Rab35 modulate Alzheimer’s disease-related protein trafficking Zhuravleva, Viktoriya 2021 Theses NeurosciencesBiologyMolecular biologyAlzheimer's disease--ResearchStress (Physiology)Glucocorticoids
72. Structural Studies of NediV-IRES-Mediated Translation Initiation Altomare, Clara Gilda 2021 Theses BiologyVirusesRNA virusesRibosomesEukaryotic cellsGenetic translation
73. Ultrastructural analysis of dendritic spine necks reveals a continuum of spine morphologies: Models Ofer, Netanel; Yuste, Rafael 2021 Data (Information) NeuronsUltrastructure (Biology)BiologyNeurosciences
74. Utilizing cell-specific chromatin accessibility states to understand appendage patterning and diversification in Drosophila Melanogaster Loker, Ryan Edmund 2021 Theses Developmental biologyGeneticsBiologyDrosophila melanogaster--Genetics
75. Adipocytes Secrete Lipid-Laden Exosomes and Influence Local Macrophage Behavior Flaherty, Stephen 2020 Theses BiologyLipaseMacrophagesFat cellsAdipose tissues--Analysis
76. Characterization of Primary Cilia and Intraflagellar Transport 20 in the Epidermis Su, Steven 2020 Theses CytologyBiologyMedicineSkinStem cells--ResearchCilia and ciliary motion
77. Circadian Regulation of Behavior and Physiology in Drosophila melanogaster O’Connor, Reed M. 2020 Theses BiologyNeurosciencesCircadian rhythmsDrosophila melanogasterSleep--Physiological aspects
78. Discovery of New Cancer Therapeutic Contexts for Ferroptosis Inducers and other Small-Molecule Drugs Ye, Ling Feng 2020 Theses BiologyCell deathDrug developmentCancer--TreatmentMolecules
79. Elucidating the abilities of MDM2, MDMX and p21 to regulate ferroptosis Venkatesh, Divya 2020 Theses BiologyGeneticsLipids--PeroxidationCell deathCancer
80. Evaluation of a precision medicine approach for hnRNP U-related developmental epileptic encephalopathy using a mouse model of disease Dugger, Sarah Anne 2020 Theses GeneticsNeurosciencesBiologyGenetic transcription--RegulationNervous system--Diseases
81. Feeding and Gastrointestinal Regulation: A Novel Domain of the Cerebellum Birkenbach, Kathryn Elise 2020 Theses NeurosciencesMedical sciencesBiologyCerebellumFood habits--Physiological aspectsDigestion
82. Genetic and Environmental Determinants of Alopecia Areata 2020 Theses BiologyAlopecia areataNutritionMedical genetics--Research
83. Hierarchical Modularity in the Reassembly of Hydra’s Nervous System Lovas, Jonathan Roek 2020 Theses NeurosciencesDevelopmental biologyBiologyHydraNeural circuitry
84. Homeostasis of Adipose Tissue Macrophages Edwin, Ethan 2020 Theses BiologyAdipose tissuesMacrophagesOntogenyPhenotype
85. Landscape of the p53 transcriptome and clinical implications Regunath, Kausik 2020 Theses BiologyGenomesCancer--Genetic aspectsTumors
86. Light and Temperature Cues Elicit Metabolic Reprogramming in the Non-phototrophic Bacterium Pseudomonas aeruginosa Kahl, Lisa Juliane 2020 Theses BiologyMicrobiologyMetabolismBiological rhythmsPhotobiologyBacteria--PhysiologyRespiration
87. Polygenic adaptation after a sudden change in environment Hayward, Laura K. 2020 Theses MathematicsBiologyEvolution (Biology)Adaptation (Biology)Ecological assessment (Biology)
88. Predicting Autonomous Promoter Activity Based on Genome-wide Modeling of Massively Parallel Reporter Data FitzPatrick, Vincent Drury 2020 Theses BiologyStatisticsPromoters (Genetics)Genomics--Statistical methodsGenetic polymorphisms
89. Role of the Synovial Membrane in Osteoarthritis Pathogenesis and Cartilage Repair Stefani, Robert 2020 Theses Biomedical engineeringMechanical engineeringBiologyOsteoarthritis--PathogenesisSynovial membranesArticular cartilage
90. Screening Whole-Genome Sequenced Strains to Investigate Genetic Determinants of Gentle Touch Sensitivity in Caenorhabditis elegans Lawry, Stephanie Terese 2020 Theses GeneticsBiologyGenomicsGenomesNematodesTouchNeurosciences
91. Sexually Dimorphic Development of the Caenorhabditis elegans Nervous System Bayer, Emily Ann 2020 Theses BiologyCaenorhabditis elegansSexual dimorphism (Animals)Genetic sex determinationTranscription factorsNervous system
92. Single-particle cryo-electron microscopy studies of ribosomes with fragmented 28S rRNA Gutierrez-Vargas, Cristina 2020 Theses BiologyStructural bioinformaticsRibosomes--StructureRNATrypanosoma cruziFragmentation reactions
93. Spatial and genomic analysis of the glioblastoma tumor microenvironment Chen, Andrew 2020 Theses BiologyBioinformaticsGlioblastoma multiformeBrain--Cancer--ResearchCancer--Immunotherapy--EvaluationMacrophages--Research
94. The impact of Zfp106 on mouse muscle homeostasis Quejada, Jose Rafael Navarro 2020 Theses BiologyMiceAmino acids--BiotechnologyMusclesHomeostasis
95. The Neural Basis of Sugar and Fat Cravings Tan, Hwei-Ee 2020 Theses NeurosciencesBiologySugarGlucoseFatAppetite
96. The Neural Basis of Sugar Preference Sisti, Alexander Charles 2020 Theses NeurosciencesMedical sciencesBiologySugarNeurons
97. Yeast adaptation and survival under acute exposure to lethal ethanol stress Yang, Jamie Siyu 2020 Theses BiologyGeneticsStress (Physiology)Adaptation (Biology)Yeast
98. Applying medicinal chemistry principles to the Olfactory Code Tahirova, Narmin Tahir 2019 Theses BiologyNeurosciencesChemistryOlfactory receptorsPharmaceutical chemistry
99. BRCA1 and 53BP1 Mediate Reprogramming Through DNA Repair Pathway Choice Georgieva, Daniela Chavdarova 2019 Theses BiologyCytologyDNA repairBRCA genes
100. Cellular and Molecular Mechanisms of Mammalian Touch-Dome Development Jenkins, Blair Addison 2019 Theses NeurosciencesBiologyMerkel cellsTouchNeurobiology