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1. XRN2 Links Transcription Termination to DNA Damage and Replication Stress

Morales, Julio C.; Richard, Patricia; Patidar, Praveen L.; Motea, Edward A.; Dang, Tuyen T.; Manley, James L.; Boothman, David A.
2016
Articles
DNA damageGenetic transcriptionSmall interfering RNAGeneticsMolecular biology

2. What Is a Genome?

Goldman, Aaron David; Landweber, Laura
2016
Articles
Genomics--Data processingCell physiologyGenomesGeneticsMolecular biology

3. Virtual Northern Analysis of the Human Genome

Hurowitz, Evan H.; Drori, Iddo; Stodden, Victoria C.; Brown, Patrick O.; Donoho, David L.
2007
Articles
GeneticsMolecular biology

4. Urinary cell mRNA profiles predictive of human kidney allograft status

Lee, John R.; Muthukumar, Thangamani; Dadhania, Darshana M.; Ding, Ruchuang; Sharma, Vijay K.; Schwartz, Joseph E.; Suthanthiran, Manikkam
2014
Articles
HomograftsMessenger RNA--AnalysisPulmonary fibrosisKidneys--TransplantationSurgeryMolecular biology

5. Urinary-Cell mRNA Profile and Acute Cellular Rejection in Kidney Allografts

Suthanthiran, Manikkam; Schwartz, Joseph E.; Ding, Ruchuang; Abecassis, Michael; Dadhania, Darshana; Samstein, Benjamin; Knechtle, Stuart J.; Friedewald, John; Becker, Yolanda T.; Sharma, Vijay K.; Williams, Nikki M.; Chang, Christina S.; Hoang, Christine; Muthukumar, Thangamani; August, Phyllis; Keslar, Karen S.; Fairchild, Robert L.; Hricik, Donald E.; Heeger, Peter S.; Han, Leiya; Liu, Jun; Riggs, Michael; Ikle, David N.; Bridges, Nancy D.; Shaked, Abraham; Clinical Trials in Organ Transplantation 04 (CTOT-04) Study Investigators
2013
Articles
HomograftsMessenger RNA--AnalysisKidneys--TransplantationSurgeryMolecular biology

6. Unsolved mysteries: How does lipid peroxidation cause ferroptosis?

Feng, Huizhong; Stockwell, Brent R.
2018
Articles
Cell deathLipids--PeroxidationCytologyMolecular biologyApoptosis

7. Transcriptome sequencing and microarray design for functional genomics in the extremophile Arabidopsis relative Thellungiella salsuginea (Eutrema salsugineum)

Lee, Yang; Giorgi, Federico M.; Lohse, Marc; Kvederaviciute, Kotryna; Klages, Sven; Usadel, Björn; Meskiene, Irute; Reinhardt, Richard; Hincha, Dirk
2013
Articles
Plant gene expressionGenomicsBotanyMolecular biology

8. TLR4 Deficiency Protects against Hepatic Fibrosis and Diethylnitrosamine-Induced Pre-Carcinogenic Liver Injury in Fibrotic Liver

Weber, Susanne Nicole; Bohner, Annika; Dapito, Dianne H.; Schwabe, Robert F.; Lammert, Frank
2016
Articles
Liver--CancerApoptosisLiver--FibrosisMedicineMolecular biologyOncology

9. TIP49b, a Regulator of Activating Transcription Factor 2 Response to Stress and DNA Damage

Ivanov, Vladimir N.; Ronai, Ze'ev; Cho, Ssang-Goo; Bhoumik, Anindita; Rosenstein, Barry; Broday, Limor
2001
Articles
ApoptosisTranscription factorsCytologyMolecular biology

10. TIA-1 Self-Multimerization, Phase Separation, and Recruitment into Stress Granules Are Dynamically Regulated by Zn2+

Rayman, Joseph B.; Karl, Kevin A.; Kandel, Eric
2018
Articles
Molecular biologyStress (Physiology)Genetic recombinationDNA-binding proteinsZinc enzymesZincCytology

11. The Volatile Anesthetic Isoflurane Increases Endothelial Adenosine Generation via Microparticle Ecto-5′-Nucleotidase (CD73) Release

Kim, Mihwa; Ham, Ahrom; Kim, Katelyn Yu-Mi; Brown, Kevin M.; Lee, H. Thomas
2014
Articles
IsofluraneEndothelial cellsAdenosineMolecular biologyMedicine

12. The TRPC2 channel forms protein-protein interactions with Homer and RTP in the rat vomeronasal organ

Mast, Thomas; Brann, Jessica H.; Fadool, Debra
2010
Articles
NeurosciencesMolecular biology

13. The Thrombopoietin Receptor Can Mediate Proliferation Without Activation of the Jak-STAT Pathway

Dorsch, Marion; Fan, Pang-Dian; Danial, Nika N.; Rothman, Paul B.; Goff, Stephen P.
1997
Articles
Molecular biologyBiochemistryMedicine

14. The T-cell leukemia related rpl10-R98S mutant traps the 60S export adapter Nmd3 in the ribosomal P site in yeast

Patchett, Stephanie; Musalgaonkar, Sharmishtha; Malyutin, Andrey; Johnson, Arlen W.
2017
Articles
T cellsRibosomesGeneticsLymphoblastic leukemiaMolecular biology

15. The Sodium/Proline Transporter PutP of Helicobacter pylori

Rivera-Ordaz, Araceli; Bracher, Susanne; Sarrach, Sannia; Li, Zheng; Shi, Lei; Quick, Matthias; Hilger, Daniel; Haas, Rainer; Jung, Heinrich
2013
Articles
Proteins--MetabolismMolecular structureHelicobacter pyloriMolecular biology

16. The Silk Road Health Project: How Mobility and Migration Status Influence HIV Risks among Male Migrant Workers in Central Asia

El-Bassel, Nabila; Gilbert, Louisa; Shaw, Stacey A.; Mergenova, Gaukhar; Terlikbayeva, Assel; Primbetova, Sholpan; Ma, Xin; Chang, Mingway P.; Ismayilova, Leyla; Hunt, Timothy; West, Brooke; Wu, Elwin; Beyrer, Chris
2016
Articles
HIV infections--Risk factorsMigrant agricultural laborers--Health and hygieneMedical sciencesMolecular biologyEpidemiology

17. The Role of Genome Accessibility in Transcription Factor Binding in Bacteria

Gomes, Antonio L.; Wang, Harris H.
2016
Articles
Genetic regulationBacterial geneticsTranscription factorsMolecular biologyPathologyGenetics

18. Thermal Adaptation of Conformational Dynamics in Ribonuclease H

Stafford, Kate A.; Robustelli, Paul; Palmer III, Arthur G,
2013
Articles
BiothermodynamicsProteins--StabilityRibonucleasesMolecular biology

19. The rate of the molecular clock and the cost of gratuitous protein synthesis

Plata, Germán Alonso; Gottesman, Maxwell E.; Vitkup, Dennis
2010
Articles
Molecular biologyBiochemistry

20. The Proper Splicing of RNAi Factors Is Critical for Pericentric Heterochromatin Assembly in Fission Yeast

Kallgren, Scott P.; Andrews, Stuart J.; Tadeo, Xavier; Hou, Haitong; Moresco, James J.; Tu, Patricia G.; Yates III, John R.; Nagy, Peter L.; Jia, Songtao
2014
Articles
RNA intereferenceHeterochromatinRNA splicingGeneticsBiologyMolecular biology

21. The molecular biology of memory: cAMP, PKA, CRE, CREB-1, CREB-2, and CPEB

Kandel, Eric
2012
Articles
Molecular biologyNeurosciences

22. The ictal wavefront is the spatiotemporal source of discharges during spontaneous human seizures

Smith, Elliot Hansen; Liou, Jyun-you; Davis, Tyler S.; Merricks, Edward M.; Kellis, Spencer S.; Weiss, Shennan A.; Greger, Bradley; House, Paul A.; McKhann II, Guy M.; Goodman, Robert R.; Emerson, Ronald G.; Bateman, Lisa Marie; Trevelyan, Andrew J.; Schevon, Catherine
2016
Articles
SpasmsElectrophysiologyMolecular biologyNeurosciences

23. The Drosophila snr1 and brm Proteins are Related to Yeast SWI/SNF Proteins and are Components of a Large Protein Complex

Dingwall, A. K.; Beek, S. J.; McCallum, C. M.; Tamkun, J. W.; Kalpana, G. V.; Goff, Stephen P.; Scott, M. P.
1995
Articles
Genetic transcription--RegulationMolecular biologyCytology

24. The CUL4-DDB1 ubiquitin ligase complex controls adult and embryonic stem cell differentiation and homeostasis

Gao, Jie; Buckley, Shannon M.; Cimmino, Luisa; Guillamot, Maria; Strikoudis, Alexandros; Cang, Yong; Goff, Stephen P.; Aifantis, Iannis
2015
Articles
UbiquitinMolecular biologyStem cellsCell differentiationHematopoiesisRegenerative medicine

25. The COMBREX Project: Design, Methodology, and Initial Results

Anton, Brian P.; Chang, Yi-Chien; Brown, Peter; Choi, Han-Pil; Faller, Lina L.; Guleria, Jyotsna; Hu, Zhenjun; Klitgord, Niels; Levy-Moonshine, Ami; Maksad, Almaz; Mazumdar, Varun; McGettrick, Mark; Osmani, Lais; Pokrzywa, Revonda; Rachlin, John; Swaminathan, Rajeswari; Allen, Benjamin; Housman, Genevieve; Monahan, Caitlin; Rochussen, Krista; Tao, Kevin; Bhagwat, Ashok S.; Brenner, Steven E.; Columbus, Linda; de Crécy-Lagard, Valérie; Ferguson, Donald; Fomenkov, Alexey; Gadda, Giovanni; Morgan, Richard D.; Osterman, Andrei L.; Rodionov, Dmitry A.; Rodionova, Irina A.; Rudd, Kenneth E.; Söll, Dieter; Spain, James; Xu, Shuang-yong; Bateman, Alex; Blumenthal, Robert M.; Bollinger, J. Martin; Chang, Woo-Suk; Ferrer, Manuel; Friedberg, Iddo; Galperin, Michael Y.; Gobeill, Julien; Haft, Daniel; Hunt, John F.; Karp, Peter; Klimke, William; Krebs, Carsten; Macelis, Dana; Madupu, Ramana; Martin, Maria J.; Miller, Jeffrey H.; O'Donovan, Claire; Palsson, Bernhard; Ruch, Patrick; Setterdahl, Aaron; Sutton, Granger; Tate, John; Yakunin, Alexander; Tchigvintsev, Dmitri; Plata, German Alonso; Hu, Jie; Greiner, Russell; Horn, David; Sjölander, Kimmen; Salzberg, Steven L.; Vitkup, Dennis; Letovsky, Stanley; Segrè, Daniel; DeLisi, Charles; Roberts, Richard J.; Steffen, Martin; Kasif, Simon
2013
Articles
Nucleotide sequenceGenomics--Data processingMicrobial proteinsMolecular biologyMicrobiologyBioinformatics

26. Targeting the CaMKII/ERK Interaction in the Heart Prevents Cardiac Hypertrophy

Cipolletta, Ersilia; Rusciano, Maria Rosaria; Maione, Angela Serena; Santulli, Gaetano; Sorriento, Daniela; Del Giudice, Carmine; Ciccarelli, Michele; Franco, Antonietta; Crola, Catherine; Campiglia, Pietro; Sala, Marina; Gomez-Monterrey, Isabel; De Luca, Nicola; Trimarco, Bruno; Iaccarino, Guido; Illario, Maddalena
2015
Articles
Molecular biologyCytology

27. Targeted gene disruption of the endogenous c-abl locus by homologous recombination with DNA encoding a selectable fusion protein

Goff, Stephen P.; Robertson, Elizabeth J.; Schwartzberg, Pamela L.
1987
Articles
Genetic recombinationMutation (Biology)Recombinant proteinsMolecular biology

28. Systematic discovery of multicomponent therapeutics

Borisy, Alexis; Elliott, Peter; Hurst, Nicole; Lee, Margaret; Lehar, Joseph; Price, E. Roydon; Serbedzija, George; Zimmerman, Grant; Foley, Michael; Stockwell, Brent R.; Keith, Curtis
2003
Articles
Bioactive compoundsMolecular biologyBiochemistryBiology

29. Synaptic State Matching: A Dynamical Architecture for Predictive Internal Representation and Feature Detection

Tavazoie, Saeed
2013
Articles
Neural networks (Neurobiology)SynapsesPerceptual-motor processesMolecular biologyBiophysicsNeurosciences

30. SUMO-Interacting Motifs of Human TRIM5α are Important for Antiviral Activity

Arriagada, Gloria; Muntean, Lucia N.; Goff, Stephen P.
2011
Articles
MicrobiologyVirologyMolecular biology

31. Structure Determination and Biochemical Characterization of a Putative HNH Endonuclease from Geobacter metallireducens GS-15

Xu, Shuang-yong; Kuzin, Alexandre P.; Seetharaman, Jayaraman; Gutjahr, Alice; Chan, Siu-Hong; Chen, Yang; Xiao, Rong; Acton, Thomas B.; Montelione, Gaetano T.; Tong, Liang
2013
Articles
DimersProteins--StructureEndonucleasesBiochemistryMolecular biology

32. Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus

Tang, Xuhua; Zhu, Yiping; Baker, Stacey L.; Bowler, Matthew W.; Chen, Benjamin Jieming; Chen, Chen; Hogg, J. Robert; Goff, Stephen P.; Song, Haiwei
2016
Articles
Mouse leukemia virusesReverse transcriptaseMolecular biologyVirologyBiophysicsGenetic translation

33. Standardizing Scavenger Receptor Nomenclature

PrabhuDas, Mercy; Bowdish, Dawn; Drickamer, Kurt; Febbraio, Maria; Herz, Joachim; Kobzik, Lester; Krieger, Monty; Loike, John D.; Means, Terry K.; Moestrup, Soren K.; Post, Steven; Sawamura, Tatsuya; Silverstein, Samuel C.; Wang, Xiang-Yang; El Khoury, Joseph
2014
Articles
CytologyImmunologyMolecular biology

34. Specificity of Anti-Tau Antibodies when Analyzing Mice Models of Alzheimer's Disease: Problems and Solutions

Petry, Franck R.; Pelletier, Jérôme; Bretteville, Alexis; Morin, Françoise; Calon, Frédéric; Hébert, Sébastien S.; Whittington, Robert A.; Planel, Emmanuel
2014
Articles
PhosphorylationAlzheimer's disease--ResearchMonoclonal antibodiesMolecular biologyBiochemistryMedicine

35. Somatic Cell Mutants Resistant to Retrovirus Replication: Intracellular Blocks during the Early Stages of Infection

Gao, Guangxia; Goff, Stephen P.
1999
Articles
Molecular biologyVirologyCytology

36. Small-molecule modulators of Hedgehog signaling: identification and characterization of Smoothened agonists and antagonists

Frank-Kamenetsky, Maria; Zhang, Xiaoyan; Bottega, Steve; Guicherit, Oivin; Wichterle, Hynek; Dudek, Henryk; Bumcrot, David; Wang, Frank; Jones, Simon; Shulok, Janine; Rubin, Lee; Porter, Jeffery
2002
Articles
TherapeuticsCellular signal transductionCytologyMolecular biology

37. siRNA-based targeting of antiapoptotic genes can reverse chemoresistance in P-glycoprotein expressing chondrosarcoma cells

Kim, Dae; Kim, Kyung-Ok; Shin, Mike; Ha, Jung; Seo, Sung; Yang, Jay; Lee, Francis Y.
2009
Articles
P-glycoproteinSmall interfering RNAGeneticsMolecular biology

38. Serum Amyloid A Induces Inflammation, Proliferation and Cell Death in Activated Hepatic Stellate Cells

Siegmund, Soren V.; Schlosser, Monika; Schildberg, Frank A.; Seki, Ekihiro; De Minicis, Samuele; Uchinami, Hiroshi; Kuntzen, Christian; Knolle, Percy A.; P.Strassburg, Christian; Schwabe, Robert F.
2016
Articles
Liver cellsAcute phase proteinsChemokinesCytologyMedical sciencesMolecular biology

39. Serotonin/Dopamine Interactions in a Hyperactive Mouse: Reduced Serotonin Receptor 1B Activity Reverses Effects of Dopamine Transporter Knockout

Sora, Ichiro; Hen, Rene; Uhl, George R.; Hall, Frank Scott
2014
Articles
DopamineCocaine--Physiological effectDrug interactionsSerotonin--ReceptorsNeurosciencesMolecular biologyMedical sciences

40. Sensing and Processing of DNA Interstrand Crosslinks by the Mismatch Repair Pathway

Kato, Niyo; Kawasoe, Yoshitaka; Williams, Hannah; Coates, Elena Lauren; Roy, Upasana; Shi, Yuqian; Beese, Lorena S.; Scharer, Orlando D.; Yan, Hong; Gottesman, Maxwell E.; Takahashi, Tatsuro S.; Gautier, Jean J.
2017
Articles
Crosslinked polymersDNA repairMolecular biologyDNA

41. Selection of Reference Genes for Quantitative Real-Time PCR Normalization in Panax ginseng at Different Stages of Growth and in Different Organs

Liu, Jing; Wang, Qun; Sun, Minying; Zhu, Linlin; Yang, Michael; Zhao, Yu
2014
Articles
Polymerase chain reactionGene expressionGinsengMolecular biologyBiology

42. Sculpting ion channel functional expression with engineered ubiquitin ligases

Kanner, Scott A.; Morgenstern, Travis James; Colecraft, Henry M.
2017
Articles
Ion channelsUbiquitinCalcium-dependent potassium channelsMolecular biologyCytology

43. SCOPE-Seq: a scalable technology for linking live cell imaging and single-cell RNA sequencing

Yuan, Jinzhou; Sheng, Jenny; Sims, Peter A.
2018
Articles
Imaging systems in biologyNucleotide sequenceMicrofluidicsMolecular biology

44. SAP97 and Cortactin Remodeling in Arrhythmogenic Purkinje Cells

Dun, Wen; Wright, Patrick; Danilo Jr, Peter; Mohler, Peter J.; Boyden, Penelope A.
2014
Articles
Myocardial infarctionPurkinje cellsAction potentials (Electrophysiology)Molecular biologyPharmacologyCytology

45. SAHA Enhances Synaptic Function and Plasticity In Vitro but Has Limited Brain Availability In Vivo and Does Not Impact Cognition

Hanson, Jesse E.; La, Hank; Plise, Emile; Chen, Yung-Hsiang; Ding, Xiao; Hanania, Taleen; Sabath, Emily V.; Alexandrov, Vadim; Brunner, Daniela; Leahy, Emer; Steiner, Pascal; Liu, Lichuan; Scearce-Levie, Kimberly; Zhou, Qiang
2013
Articles
NeuroplasticityHistone deacetylaseMemoryMolecular biologyPsychologyNeurosciences

46. Role of SUMO-1 and SUMO Interacting Motifs in Rhesus TRIM5α-mediated Restriction

Lukic, Zana; Arriagada, Gloria; Goff, Stephen P.; Campbell, Edward M.
2013
Articles
Molecular biologyVirology

47. Role of promoter hypermethylation in Cisplatin treatment response of male germ cell tumors

Narayan, Gopeshwar; Houldsworth, Jane; Bacik, Jennifer; Dobrzynski, Deborah; Assaad, Adel; Mansukhani, Mahesh M.; Reuter, Victor; Bosl, George; Chaganti, Raju; Vundavalli, Murty V.; Koul, Sanjay; McKiernan, James M.
2004
Articles
OncologyMolecular biology

48. RNF169 limits 53BP1 deposition at DSBs to stimulate single-strand annealing repair

An, Liwei; Dong, Chao; Li, Junshi; Chen, Jie; Yuan, Jingsong; Huang, Jun; Chan, Kui Ming; Yu, Cheng-han; Huen, Michael S. Y.
2018
Articles
DNA--SynthesisDNA--ResearchMolecular biology

49. Rifaximin-Mediated Changes to the Epithelial Cell Proteome: 2-D Gel Analysis

Schrodt, Caroline; McHugh, Erin E.; Gawinowicz, Mary Ann; DuPont, Herbert L.; Brown, Eric L.
2013
Articles
DNA-binding proteinsGel electrophoresisEpithelial cellsMolecular biologyCytology

50. Ribosomal Proteins RPL37, RPS15 and RPS20 Regulate the Mdm2-p53-MdmX Network

Daftuar, Lilyn; Zhu, Yan; Jacq, Xavier; Prives, Carol L.
2013
Articles
Small interfering RNANucleoproteinsGene expressionUbiquitinMolecular biologyBiology