1. Quantitative Analysis of the DNA Methylation Sensitivity of Transcription Factor Complexes Kribelbauer, Judith F.; Laptenko, Oleg; Chen, Siying; Martini, Gabriella D.; Freed-Pastor, William Allen; Prives, Carol L.; Mann, Richard S.; Bussemaker, Harmen J. 2017 Articles DNA--MethylationTranscription factorsGenetic regulationDNA-protein interactionsEpigenetics
2. A pan-cancer analysis of driver gene mutations, DNA methylation and gene expressions reveals that chromatin remodeling is a major mechanism inducing global changes in cancer epigenomes Youn, Ahrim; Kim, Kyung In; Rabadan, Raul; Tycko, Benjamin; Shen, Yufeng; Wang, Shuang 2018 Articles DNA--MethylationGene expressionCancer--Genetic aspectsTumorsEpigenetics
3. Systematic prediction of DNA shape changes due to CpG methylation explains epigenetic effects on protein–DNA binding Rao, Satyanarayan; Chiu, Tsu-Pei; Kribelbauer, Judith F.; Mann, Richard S.; Bussemaker, Harmen J.; Rohs, Remo 2018 Articles DNA--MethylationEpigeneticsDNA-binding proteinsSystems biology