1. Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data Zhou, Pengcheng; Resendez, Shanna L.; Rodriguez-Romaguera, Jose; Jimenez, Jessica; Neufeld, Shay Q.; Giovannucci, Andrea; Friedrich, Johannes; Pnevmatikakis, Eftychios; Stuber, Garret D.; Hen, Rene; Kheirbek, Mazen A.; Sabatini, Bernardo L.; Kass, Robert E.; Paninski, Liam 2018 Articles NeurosciencesNeuronsBiometryEndoscopyStatistics
2. Tensor Analysis Reveals Distinct Population Structure that Parallels the Different Computational Roles of Areas M1 and V1 Seely, Jeffrey Scott; Kaufman, Matthew T.; Ryu, Stephen I.; Shenoy, Krishna V.; Cunningham, John Patrick; Churchland, Mark M. 2016 Articles Motor cortexCalculus of tensorsNeuronsVisual cortexNeurosciencesBiometry
3. An Assortment of Unsupervised and Supervised Applications to Large Data Agne, Michael Robert 2015 Theses StatisticsBiometry
4. A dual-clustering framework for association screening with whole genome sequencing data and longitudinal traits Lui, Ying; Huang, Chien-Hsun; Hu, Inchi; Zheng, Tian; Lo, Shaw-Hwa 2014 Articles GeneticsBiometry
5. A partition-based approach to identify gene-environment interactions in genome wide association studies Fan, Ruixue; Huang, Chien-Hsun; Hu, Inchi; Wang, Haitan; Zheng, Tian; Lo, Shaw-Hwa 2014 Articles GeneticsBiometry
6. Considering interactive effects in the identification of influential regions with extremely rare variants via fixed bin approach Agne, Michael; Huang, Chien-Hsun; Hu, Inchi; Wang, Haitian; Zheng, Tian; Lo, Shaw-Hwa 2014 Articles GeneticsBiometry
7. Correction: A dual clustering framework for association screening with whole genome sequencing data and longitudinal traits Liu, Ying; Huang, Chien-Hsun; Hu, Inchi; Lo, Shaw-Hwa; Zheng, Tian 2014 Articles GenomicsBiometry
8. Discovering pure gene-environment interactions in blood pressure genome-wide association studies data: a two-step approach incorporating new statistics Wang, Maggie Haitan; Huang, Chien-Hsun; Zheng, Tian; Lo, Shaw-Hwa; Hu, Inchi 2014 Articles GeneticsBiometry
9. Bayesian hierarchical graph-structured model for pathway analysis using gene expression data Zhou, Hui; Zheng, Tian 2013 Articles BiometryGenetics
10. Association screening for genes with multiple potentially rare variants: an inverse-probability weighted clustering approach Liu, Ying; Huang, Chien-Hsun; Hu, Inchi; Zheng, Tian; Lo, Shaw-Hwa 2011 Articles GeneticsBiometry
11. Identifying influential regions in extremely rare variants using a fixed-bin approach Agne, Michael; Huang, Chien-Hsun; Hu, Inchi; Wang, Haitian; Zheng, Tian; Lo, Shaw-Hwa 2011 Articles GeneticsBiometry
12. Identifying rare disease variants in the Genetic Analysis Workshop 17 simulated data: a comparison of several statistical approaches Fan, Ruixue; Huang, Chien-Hsun; Lo, Shaw-Hwa; Zheng, Tian; Ionita-Laza, Iuliana 2011 Articles GeneticsBiometry
13. New insights into old methods for identifying causal rare variants Hu, Inchi; Zheng, Tian; Huang, Chien-Hsun; Lo, Shaw-Hwa; Wang, Haitian 2011 Articles Human genetics--VariationBiometry--Statistical methodsStatistics--MethodologyBiometryStatistics
14. Genome-wide gene-based analysis of rheumatoid arthritis-associated interaction with PTPN22 and HLA-DRB1 Lo, Shaw-Hwa; Chong, Lei; Xie, Jun; Huang, Chien Hsun; Qiao, Bo; Zheng, Tian 2009 Articles GeneticsBiometry
15. Rheumatoid arthritis-associated gene-gene interaction network for rheumatoid arthritis candidate genes Zheng, Tian; Qiao, Bo; Lo, Shaw-Hwa; Xie, Jun; Huang, Chien-Hsun; Cong, Lei 2009 Articles BiometryGenetics
16. Discovering interactions among BRCA1 and other candidate genes associated with sporadic breast cancer Lo, Shaw-Hwa; Chernoff, Herman; Cong, Lei; Ding, Yuejing; Zheng, Tian 2008 Articles BiometryGenetics
17. Genetic-linkage mapping of complex hereditary disorders to a whole-genome molecular-interaction network Iossifov, Ivan; Zheng, Tian; Baron, Miron; Gilliam, T. Conrad; Rzhetsky, Andrey 2008 Articles BiometryGenetics
18. Identification of gene interactions associated with disease from gene expression data using synergy networks Watkinson, John; Wang, Xiaodong; Zheng, Tian; Anastassiou, Dimitris 2008 Articles GeneticsBiometry
19. Selecting informative genes for discriminant analysis using multigene expression profiles. Yan, Xin; Zheng, Tian 2008 Articles BiometryGenetics
20. Constructing gene association networks for rheumatoid arthritis using the backward genotype-trait association (BGTA) algorithm Ding, Yuejing; Cong, Lei; Ionita-Laza, Iuliana; Lo, Shaw-Hwa; Zheng, Tian 2007 Articles GeneticsBiometry
21. Joint study of genetic regulators for expression traits related to breast cancer Zheng, Tian; Wang, Shuang; Cong, Lei; Ding, Yuejing; Ionita-Laza, Iuliana; Lo, Shaw-Hwa 2007 Articles GeneticsBiometryBreast--Cancer--Genetic aspects
22. Pattern-based mining strategy to detect multi-locus association and gene × environment interaction Li, Zhong; Zheng, Tian; Califano, Andrea; Floratos, Aristidis 2007 Articles GeneticsBiometry
23. Transcription activity hot spot, is it real or an artifact? Wang, Shuang; Zheng, Tian; Wang, Yuanjia 2007 Articles GeneticsBiometry
24. A note on QTL detecting for censored traits Fang, Yixin 2006 Articles Censored observations (Statistics)Genetics--Mathematical modelsGeneticsBiometry
25. Backward Genotype-Trait Association (BGTA)-Based Dissection of Complex Traits in Case-Control Designs Zheng, Tian; Wang, Hui; Lo, Shaw-Hwa 2006 Articles StatisticsGeneticsBiometry
26. Probing genetic overlap among complex human phenotypes Rzhetsky, Andrey; Wajngurt, David; Park, Naeun; Zheng, Tian 2006 Articles BiometryGenetics
27. A demonstration and findings of a statistical approach through reanalysis of inflammatory bowel disease data Lo, Shaw-Hwa; Zheng, Tian 2004 Articles BiometryGenetics
28. Backward Haplotype Transmission Association (BHTA) Algorithm-A Fast Multiple-Marker Screening Method Lo, Shaw-Hwa; Zheng, Tian 2002 Articles BiometryGenetics