1. Accurate and sensitive quantification of protein-DNA binding affinity Rastogi, Chaitanya; Rube, Hans Tomas; Kribelbauer, Judith Franziska; Crocker, Justin; Loker, Ryan Edmund; Martini, Gabriella D.; Laptenko, Oleg; Freed-Pastor, William Allen; Prives, Carol L.; Stern, David L.; Mann, Richard S.; Bussemaker, Harmen J. 2018 Articles Transcription factorsDNA-protein interactionsProtein bindingProbabilities--Mathematical models
2. A cellular and regulatory map of the GABAergic nervous system of C. elegans Gendrel, Marie; Atlas, Emily G.; Hobert, Oliver 2016 Articles NeurosciencesNeurotransmittersNeuronsCaenorhabditis elegans
3. Acetylation of C-terminal lysines modulates protein turnover and stability of Connexin-32 Alaei, Sarah R.; Abrams, Charles K.; Bulinski, Jeannette Chloë; Hertzberg, Elliot L.; Freidin, Mona M. 2018 Articles ConnexinsAcetylationUbiquitin
4. A Comparative Analysis of Genome Rearrangement in Ciliates Feng, Yi 2021 Theses BiologyBioinformaticsEvolution (Biology)Gene rearrangementCiliata--GeneticsEuplotesGenetic code
5. A Computational Approach to Rational Engineering of Protein Crystallization Banayan, Nooriel Elan 2023 Theses BiophysicsX-ray crystallographyCrystalloids (Botany)CrystallizationArginineLysine
6. Acoustic structure of the five perceptual dimensions of timbre in orchestral instrument tones Elliot, Taffeta Marie; Theunissen, Frédéric E.; Hamilton, Liberty S. 2013 Articles Music
7. A custom two-photon and second-harmonic microscope Nikolenko, Volodymyr; Nemet, Boaz; Yuste, Rafael 2002 Articles BiologyMedical sciencesGreen fluorescent proteinDiagnostic imaging
8. A Deficit in Parvalbumin-Expressing Interneurons in the Hippocampus Leads to Physiological and Behavioral Phenotypes Relevant to Schizophrenia in a Genetic Mouse Model Gilani, Ahmed Ijaz 2014 Theses Hippocampus (Brain)SchizophreniaInterneuronsPsychobiologyPsychophysiology
9. Adipocytes Secrete Lipid-Laden Exosomes and Influence Local Macrophage Behavior Flaherty, Stephen 2020 Theses BiologyLipaseMacrophagesFat cellsAdipose tissues--Analysis
10. A framework for systematic promoter motif discovery and expression profiling from high dimensional brain transcriptome data Lieberman, Jeremy A. 2013 Theses GeneticsNeurosciences
11. A genetically-encoded biosensor and a conditional gene expression system for investigating Notch activity in vivo Shaffer, Justin Matthew 2022 Theses Developmental biologyGeneticsGene expressionCell interactionCaenorhabditis elegans--GeneticsExons (Genetics)
12. A Genomic Map of the Effects of Linked Selection in Drosophila Elyashiv, Eyal; Sattath, Shmuel; Hu, Tina T.; Strutsovsky, Alon; McVicker, Graham; Andolfatto, Peter; Coop, Graham; Sella, Guy 2016 Articles Evolutionary geneticsBiodiversityNatural selection--Mathematical modelsGeneticsBiology
13. Allosteric Coupling, Nucleotide Binding and ATP Hydrolysis by Hsp70 Chaperones on a Structural Basis Wang, Wei 2018 Theses BiologyBiochemistryBiophysicsAllosteric regulationHeat shock proteins
14. Altered Cortical Ensembles in Mouse Models of Schizophrenia Hamm, Jordan P.; Peterka, Darcy; Gogos, Joseph A.; Yuste, Rafael 2017 Articles SchizophreniaKetamineNeurosciencesBrain--PhysiologyNeural circuitry
15. An Aerobic Exercise: Defining the Roles of Pseudomonas aeruginosa Terminal Oxidases Jo, Jeanyoung; Price-Whelan, Alexa; Dietrich, Lars 2014 Articles BiochemistryBiologyMicrobiology
16. Analysis of Conformational Continuum and Free-energy Landscapes from Manifold Embedding of Single-particle Cryo-EM Ensembles of Biomolecules Seitz, Evan Elliott 2022 Theses Molecular biologyBiomoleculesElectron microscopy—Data processingMachine learningRiemannian manifoldsGibbs' free energyPath analysis (Statistics)RibosomesCOVID-19 (Disease)--Data processing
17. Analyzing Genomic Studies and a Screen for Genes that Suppress Information Loss During DNA Damage Repair Pierce, Steven 2013 Theses BiologyCytologyBioinformatics
18. An atlas of Caenorhabditis elegans chemoreceptor expression Iglesias, Berta Vidal; Aghayeva, Ulkar; Sun, Haosheng; Wang, Chen; Glenwinkel, Lori Ann; Bayer, Emily Ann; Hobert, Oliver 2018 Articles Caenorhabditis elegansChemoreceptorsNeurosciencesBiology
19. A non-canonical Hippo signaling pathway regulates DeltaNp63 in cancer cells Low Calle, Ana Maria 2022 Theses Molecular biologySquamous cell carcinomaTranscription factors
20. An orphan cbb3-type cytochrome oxidase subunit supports Pseudomonas aeruginosa biofilm growth and virulence Jo, Jeanyoung; Cortez, Krista Lynn; Cornell, William-Cole; Price-Whelan, Alexa M.; Dietrich, Lars 2017 Articles BiofilmsPathogenic bacteriaPseudomonas aeruginosaCytochrome oxidaseBiology