101. Multi-level analysis of regulation of EGFR signalling during Drosophila melanogaster leg proximal-distal axis patterning Newcomb, Susan Elizabeth 2018 Theses BiologyGeneticsGrowth factors--ReceptorsEpidermal growth factorDrosophila melanogaster
102. On the Role of Sensory Cancellation and Corollary Discharge in Neural Coding and Behavior Enikolopov, Armen 2018 Theses NeurosciencesBiologySensory stimulationCochlear nucleus
103. Simultaneous two-photon imaging and two-photon optogenetics of cortical circuits in three dimensions Yang, Weijian; Carrillo-Reid, Luis; Bando, Yuki; Peterka, Darcy; Yuste, Rafael 2018 Articles BiologyOptogeneticsNeural circuitryImaging systems in biology
104. Spatially restricted regulation of cell competition by the cytokine Spaetzle Alpar, Elif Lale 2018 Theses BiologyGeneticsCytokinesCells--Growth--Regulation
105. Structural Studies of the Integrator Complex -- pre-UsnRNA 3'-end Processing Machinery Wu, Yixuan 2018 Theses BiologyBiochemistryCatalytic RNA
106. The Molecular Mechanism of Replication Independent Repair of DNA Interstrand Crosslinks Kato, Niyo 2018 Theses BiologyGeneticsDNA repairCrosslinking (Polymerization)Molecular biology
107. The Mre11-Rad50-Xrs2 Complex in the DNA Damage Response Oh, Julyun 2018 Theses BiologyGeneticsMolecular biologyDNA damageDNA repair
108. The Physical State of Water in Dormant Bacteria DeLay, Michael 2018 Theses BiophysicsBacteriaBacterial sporesWaterBiology
109. Understand Biology Using Single Cell RNA-Sequencing Ding, Hongxu 2018 Theses BiologyNucleotide sequenceSystems biology
110. Applying medicinal chemistry principles to the Olfactory Code Tahirova, Narmin Tahir 2019 Theses BiologyNeurosciencesChemistryOlfactory receptorsPharmaceutical chemistry
111. Computational and Imaging Methods for Studying Neuronal Populations during Behavior Han, Shuting 2019 Theses BiologyNeurosciencesMachine learningBrain--ImagingNeuropsychiatryAnimal behaviorNeurons
112. Life history effects on neutral polymorphism and divergence rates, in autosomes and sex chromosomes Amster, Guy 2019 Theses BiologySex chromosomesGenetic polymorphismsPopulation geneticsChromosomesBiodiversity
113. Mapping the whole-body muscle activity of Hydra vulgaris Szymanski, John Robert; Yuste, Rafael 2019 Data (Information) BiologyHydraMusclesEvolution (Biology)
114. Novel functions of C9ORF72, a gene involved in ALS/FTD Fomin, Vitalay 2019 Theses BiologyBiochemistryGeneticsCytologyAmyotrophic lateral sclerosisFrontotemporal dementiaGene expression
115. Population Genetics of Mutation Load and Quantitative Traits in Humans Simons, Yuval Benjamin 2019 Theses GeneticsBiologyHuman population geneticsMutation (Biology)
116. Quantifying spatiotemporal dynamics of human gut microbiota and metabolic limitations of cancer cell growth Ji, Brian 2019 Theses BiologyBiological systemsCancer cells--Growth--RegulationGastrointestinal system--MicrobiologyCell metabolism
117. Quantitative trait variation and adaptation in contemporary humans Mostafavi, Hakhamanesh 2019 Theses BiologyGeneticsHuman evolutionGenomes--Data processingHuman genetics--VariationMortality
118. Structural studies of the yeast transcription termination complex Nrd1-Nab3-Sen1 Zhang, Yinglu 2019 Theses BiologyMolecular biologyBiochemistryRNA polymerasesGenetic transcription
119. Studies on RNA Regulation: From Enhancer RNAs to RBBP6 Isoform3 Chen, Yaqiong 2019 Theses Molecular biologyRNAGenetic regulationBiology
120. Adipocytes Secrete Lipid-Laden Exosomes and Influence Local Macrophage Behavior Flaherty, Stephen 2020 Theses BiologyLipaseMacrophagesFat cellsAdipose tissues--Analysis
121. Elucidating the abilities of MDM2, MDMX and p21 to regulate ferroptosis Venkatesh, Divya 2020 Theses BiologyGeneticsLipids--PeroxidationCell deathCancer
122. Hierarchical Modularity in the Reassembly of Hydra’s Nervous System Lovas, Jonathan Roek 2020 Theses NeurosciencesDevelopmental biologyBiologyHydraNeural circuitry
123. Landscape of the p53 transcriptome and clinical implications Regunath, Kausik 2020 Theses BiologyGenomesCancer--Genetic aspectsTumors
124. Light and Temperature Cues Elicit Metabolic Reprogramming in the Non-phototrophic Bacterium Pseudomonas aeruginosa Kahl, Lisa Juliane 2020 Theses BiologyMicrobiologyMetabolismBiological rhythmsPhotobiologyBacteria--PhysiologyRespiration
125. Predicting Autonomous Promoter Activity Based on Genome-wide Modeling of Massively Parallel Reporter Data FitzPatrick, Vincent Drury 2020 Theses BiologyStatisticsPromoters (Genetics)Genomics--Statistical methodsGenetic polymorphisms
126. Screening Whole-Genome Sequenced Strains to Investigate Genetic Determinants of Gentle Touch Sensitivity in Caenorhabditis elegans Lawry, Stephanie Terese 2020 Theses GeneticsBiologyGenomicsGenomesNematodesTouchNeurosciences
127. Sexually Dimorphic Development of the Caenorhabditis elegans Nervous System Bayer, Emily Ann 2020 Theses BiologyCaenorhabditis elegansSexual dimorphism (Animals)Genetic sex determinationTranscription factorsNervous system
128. Single-particle cryo-electron microscopy studies of ribosomes with fragmented 28S rRNA Gutierrez-Vargas, Cristina 2020 Theses BiologyStructural bioinformaticsRibosomes--StructureRNATrypanosoma cruziFragmentation reactions
129. The Neural Basis of Sugar and Fat Cravings Tan, Hwei-Ee 2020 Theses NeurosciencesBiologySugarGlucoseFatAppetite
130. A Comparative Analysis of Genome Rearrangement in Ciliates Feng, Yi 2021 Theses BiologyBioinformaticsEvolution (Biology)Gene rearrangementCiliata--GeneticsEuplotesGenetic code
131. Broad-scale variation in human genetic diversity levels is predicted by purifying selection on coding and non-coding elements Murphy, David 2021 Theses GeneticsEvolution (Biology)BiologyHuman genomeBiodiversity
132. Disentangling mutation and selection in human genetic variation: promises and pitfalls Agarwal, Ipsita 2021 Theses BiologyGeneticsEvolution (Biology)Mutation (Biology)Human genomeExomes
133. Electromechanical Coupling in Cells and Its Effects on Membrane Tension and Conductance Jones Molina, John Anthony 2021 Theses BiophysicsCytologyBiologyCell membranes
134. Framework for Mapping Gene Regulation via Single-cell Genetic Screens Tan, Xiangtian 2021 Theses BiologyCytologyGenetic transcription--RegulationCancer cellsProteins--Analysis
135. Function and Regulation of ALS/FTD-associated RNA Binding Protein FUS Tsai, Yueh-Lin 2021 Theses BiologyCytologyMolecular biologyRNA-protein interactionsAmyotrophic lateral sclerosisDementia
136. Mutagenic Repair Outcomes of DNA Double-Strand Breaks Al-Zain, Amr M. 2021 Theses BiologyMolecular biologyDouble-stranded RNACancer--EtiologyCancer--Genetic aspectsGenomesMutagenesis
137. Novel Functions for Dynein Adaptor RILP in Neuronal Autophagy Khobrekar, Noopur V. 2021 Theses BiologyNeurobiologyBiochemistryDyneinAutophagic vacuolesCell organelles
138. Regulation of heterochromatin formation by the JmjC-domain protein Epe1 Bao, Kehan 2021 Theses BiologyEukaryotic cells--GeneticsHeterochromatinChromatinDNA
139. Role of Mu-Opioid Receptors in the Behavioral Effects of the Antidepressant Tianeptine Han, Jaena 2021 Theses BiologyNeurosciencesDepression, Mental--TreatmentAntidepressantsSerotonin uptake inhibitorsMice
140. Structural Studies of NediV-IRES-Mediated Translation Initiation Altomare, Clara Gilda 2021 Theses BiologyVirusesRNA virusesRibosomesEukaryotic cellsGenetic translation
141. Ultrastructural analysis of dendritic spine necks reveals a continuum of spine morphologies: Models Ofer, Netanel; Yuste, Rafael 2021 Data (Information) NeuronsUltrastructure (Biology)BiologyNeurosciences
142. Auditory Tuning in Vocal Learning Songbirds Yeh, Yow-Tyng 2022 Theses BiologyNeurosciencesSongbirdsBirds--VocalizationBirdsongsSensorimotor cortex
143. Cardiomyopathy at the Intersection of Stem Cells and Tissue Engineering Wang, Bryan Zicheng 2022 Theses BiologyMyocardium--DiseasesStem cellsGene editingTissue engineeringHeart--Diseases--Genetic aspects
144. Development of genetically intact bioengineered spores of Bacillus subtilis Flores Quijano, Juan Manuel de Jesus 2022 Theses BiologyBacillus subtilis--GeneticsPlasmids--GeneticsBiotechnologyNatural pesticidesProbiotics
145. Expression and Functional Analyses of the Entire Cadherin Gene Family in C. elegans Majeed, Maryam 2022 Theses BiologyNeurosciencesCaenorhabditis elegans--GeneticsGene expressionCadherins
146. Understanding and Engineering Multicomponent Living Systems: Examples from Synthetic Genomics and Engineered Living Materials McBee, Andrew Ross MacKay 2022 Theses BiologySynthetic biologyGenomicsMetazoaAmino acidsValineMycelium
147. Cellular arrangement in Pseudomonas aeruginosa biofilms Dayton, Hannah Teckla 2023 Theses BiologyPseudomonas aeruginosaBiofilmsDrug resistance in microorganisms
148. Comparative analysis of nuclear proteomes and strain-specific chromosomes in Oxytricha trifallax Lu, Michael 2023 Theses BiologyCiliata--GeneticsGenomesProteomicsChromosomes
149. Discovery and Optimization of Novel Small-Molecule Inhibitors of Glutathione Peroxidase 4 Lin, Annie 2023 Theses BiologyDrug resistance in cancer cellsCell deathGlutathioneCancer cells--Effect of drugs on
150. Exploring a non-canonical mode of gene regulation mediated by mRNA transcript isoform switching in the context of mammalian development Keskin, Abdurrahman 2023 Theses BiologyEmbryonic stem cellsGene expressionMammals--GeneticsMammals--Development
151. Genetic Variant Effects on Transcription Factor Regulation Li, Xiaoting 2023 Theses BiologyHuman genetics--VariationDiseases--Risk factorsHuman genomeGenomicsGenetic transcriptionGene expression
152. Population genetic models of mutation rate evolution and adaptation and the impact of essential workers in the context of social distancing for epidemic control Milligan, William Robert 2023 Theses BiologyEvolution (Biology)MutagenesisGerm cellsSocial distancing (Public health)Epidemics--PreventionEpidemiologyAllelomorphismIndustrial hygiene
153. Regulation of EGFR signal transduction and cell division in quiescent Vulval Precursor Cells during dauer developmental arrest O'Keeffe, Catherine 2023 Theses BiologyDevelopmental biologyCaenorhabditis elegansStem cellsVulvaCell division
154. Regulation of redox metabolism in Pseudomonas aeruginosa biofilms Smiley, Marina K. 2023 Theses MicrobiologyBiologyPseudomonas aeruginosaBiofilmsBacteriaDenitrificationPhenazineAnti-infective agents
155. Structural and Functional Studies of CNG channels Hu, Zhengshan 2023 Theses BiologyBiochemistryBiophysicsCyclic nucleotides--AnalysisIon channelsCryoelectronicsElectron microscopy
156. Studies on Eukaryotic Pre-mRNA 3'-End Processing: Insights into PAS Recognition and the U7 snRNP activity Gutierrez Tamayo, Pedro A. 2023 Theses BiologyBiochemical geneticsBiophysicsEukaryotic cells--GeneticsMessenger RNAVertebratesMammals--Molecular genetics
157. The Role of Kinesins in Cell Fate Determination During Neurogenesis Helmer, Paige 2023 Theses BiologyKinesinNeurogeneticsNeuronsBrain--PhysiologyMammals--Nervous systemNeuroglia
158. Widespread 3D genome reorganization precedes programmed DNA rearrangement in Oxytricha trifallax Villano, Danylo Julian 2023 Theses BiologyMolecular biologyGeneticsGenomesCiliataRNAGene rearrangement
159. Behavioral fingerprinting of the naked mole-rat (Heterocephalus glaber) Schwark, Ryan William 2024 Theses BiologyNaked mole ratAnimal behaviorSocial behavior in animalsWhiskersTouch
160. Coordination of histone chaperones for parental histone segregation and epigenetic inheritance Fang, Yimeng 2024 Theses BiologyEpigeneticsHistonesGene expressionNucleotide sequenceDNA replicationHeredity
161. Exploring the effects of dietary fatty acids and iron on modulating sensitivity of lymphomas to ferroptosis Ahmed, Eman Riaz 2024 Theses BiologyLymphomasFatty acidsPhospholipidsPeroxidationImidazolesIron
162. Mammalian translation termination intermediates captured using PDMS microfluidics-based time-resolved cryo-EM (TRCEM) Dadhwal, Prikshat 2024 Theses BiologyBiochemistryBiophysicsEukaryotic cells--GeneticsGenetic translationRibosomesSilicaCryoelectronics
163. Mechanisms for canceling self-generated sounds in a cerebellum-like circuit Zhang, Qianyun 2024 Theses NeurosciencesBiologyMachine learningMice--PhysiologyWhiskersGait in animalsCerebellumMammals--Nervous systemPurkinje cells
164. Patient Derived Organoids as a Platform for Assessing Therapy Response and Characterizing Epithelial Plasticity in Bladder Cancer Syed, Talal Ahsan 2024 Theses BiologyBioinformaticsCytologyBladder--Cancer--TreatmentEpitheliumCystoscopesFluorescence spectroscopyBladder--Cancer--DiagnosisUnited States. Food and Drug Administration
165. Regulation of threat responses by dynorphin in the ventromedial prefrontal cortex Limoges, Aaron 2024 Theses BiologyNeurosciencesPsychologyDynorphinsPrefrontal cortexFear--Physiological aspectsConflict (Psychology)--Physiological aspectsOpioids--ReceptorsNeurons
166. Replication stress in activated human NK cells induces sensitivity to apoptosis Guilz, Nicole 2024 Theses BiologyImmunologyKiller cellsApoptosisDiseasesDNA helicases
167. Spatial and Functional Genomic Profiling of Cell States Gu, Ruoyu 2024 Theses BiologyGenomesRNAOxytrichidaeDNA damageDNA repair
168. Spike transmission failures in axons from mouse cortical pyramidal neurons in vivo - raw data Ofer, Netanel; Yuste, Rafael; Cornejo Corona, Victor Hugo 2024 Data (Information) AxonsNeuronsCerebral cortexNeurosciencesBiology
169. The evolution of meiotic recombination in vertebrates: the case of snakes Hoge, Carla R. 2024 Theses BiologyCorn snakeDNA-binding proteinsGeneticsVertebrates