1. The evolution of meiotic recombination in vertebrates: the case of snakes Hoge, Carla R. 2024 Theses BiologyCorn snakeDNA-binding proteinsGeneticsVertebrates
2. Homology-Directed Repair of One- and Two-Ended DNA Double-Strand Breaks Kimble, Michael Taylor 2023 Theses GeneticsDouble-stranded RNADNA repairGenomesDNA damageYeast--GeneticsGenetic recombination
3. Widespread 3D genome reorganization precedes programmed DNA rearrangement in Oxytricha trifallax Villano, Danylo Julian 2023 Theses BiologyMolecular biologyGeneticsGenomesCiliataRNAGene rearrangement
4. A genetically-encoded biosensor and a conditional gene expression system for investigating Notch activity in vivo Shaffer, Justin Matthew 2022 Theses Developmental biologyGeneticsGene expressionCell interactionCaenorhabditis elegans--GeneticsExons (Genetics)
5. Broad-scale variation in human genetic diversity levels is predicted by purifying selection on coding and non-coding elements Murphy, David 2021 Theses GeneticsEvolution (Biology)BiologyHuman genomeBiodiversity
6. Disentangling mutation and selection in human genetic variation: promises and pitfalls Agarwal, Ipsita 2021 Theses BiologyGeneticsEvolution (Biology)Mutation (Biology)Human genomeExomes
7. Investigations into a bHLH code for Caenorhabditis elegans somatic gonad regulatory cell fate and function Littleford, Hana Elisabeth 2021 Theses Developmental biologyGeneticsCaenorhabditis elegans--GeneticsGenetic regulation
8. Neuronal specification by homeodomain transcription factors in Caenorhabditis elegans Reilly, Molly Booth 2021 Theses NeurosciencesDevelopmental biologyGeneticsCaenorhabditis elegansNervous systemNeuronsHomeobox genes
9. Reading the Disease Leaves: Signals, signatures and synchrony in neurodevelopmental disorders Ressler, Andrew 2021 Theses NeurosciencesGeneticsNervous system--Diseases--Genetic aspectsNeurodevelopmental treatmentTherapeuticsPhenotypeDiseases--Animal modelsToxicity testing--In vitro
10. Circuit transcription factors in Caenorhabditis elegans Berghoff, Emily Greta 2020 Theses NeurosciencesGeneticsNeuronsNervous systemGene expression--ResearchCaenorhabditis elegans--GeneticsNeurotransmitters
11. Elucidating the abilities of MDM2, MDMX and p21 to regulate ferroptosis Venkatesh, Divya 2020 Theses BiologyGeneticsLipids--PeroxidationCell deathCancer
12. Investigations into roles for endocytosis in LIN-12/Notch signaling and its regulation Chan, Jessica Yu 2020 Theses GeneticsEndocytosisLigands (Biochemistry)Caenorhabditis elegansVulvaCellular signal transduction
13. Screening Whole-Genome Sequenced Strains to Investigate Genetic Determinants of Gentle Touch Sensitivity in Caenorhabditis elegans Lawry, Stephanie Terese 2020 Theses GeneticsBiologyGenomicsGenomesNematodesTouchNeurosciences
14. Cell fate restriction in Caenorhabditis elegans Rahe, Dylan Parker 2019 Theses GeneticsCaenorhabditis elegansCell determinationCytology
15. Novel functions of C9ORF72, a gene involved in ALS/FTD Fomin, Vitalay 2019 Theses BiologyBiochemistryGeneticsCytologyAmyotrophic lateral sclerosisFrontotemporal dementiaGene expression
16. Population Genetics of Mutation Load and Quantitative Traits in Humans Simons, Yuval Benjamin 2019 Theses GeneticsBiologyHuman population geneticsMutation (Biology)
17. Quantitative trait variation and adaptation in contemporary humans Mostafavi, Hakhamanesh 2019 Theses BiologyGeneticsHuman evolutionGenomes--Data processingHuman genetics--VariationMortality
18. Systems Genetics of DNA Damage Tolerance – Cisplatin, RAD5 & CRISPR-mediated Nonsense Bryant, Eric Edward 2019 Theses GeneticsBioinformaticsBiology--ClassificationDNA damageCisplatinCRISPR (Genetics)
19. A population genetic interpretation of GWAS findings for human quantitative traits Simons, Yuval Benjamin; Bullaughey, Kevin; Hudson, Richard R.; Sella, Guy 2018 Articles GeneticsPhenotypeBiologyHuman genome
20. Multi-level analysis of regulation of EGFR signalling during Drosophila melanogaster leg proximal-distal axis patterning Newcomb, Susan Elizabeth 2018 Theses BiologyGeneticsGrowth factors--ReceptorsEpidermal growth factorDrosophila melanogaster
21. Redox-Balancing Strategies in Pseudomonas aeruginosa Lin, Yu-Cheng 2018 Theses MicrobiologyGeneticsPseudomonas aeruginosaBiofilmsOxidation-reduction reaction
22. Shared Molecular Features of Inherited and Sporadic ALS/FTD Conlon, Erin Grace 2018 Theses BiochemistryGeneticsNeurosciencesAmyotrophic lateral sclerosisFrontotemporal dementiaMolecular biology
23. Spatially restricted regulation of cell competition by the cytokine Spaetzle Alpar, Elif Lale 2018 Theses BiologyGeneticsCytokinesCells--Growth--Regulation
24. The Molecular Mechanism of Replication Independent Repair of DNA Interstrand Crosslinks Kato, Niyo 2018 Theses BiologyGeneticsDNA repairCrosslinking (Polymerization)Molecular biology
25. The Mre11-Rad50-Xrs2 Complex in the DNA Damage Response Oh, Julyun 2018 Theses BiologyGeneticsMolecular biologyDNA damageDNA repair
26. Identifying genetic variants that affect viability in large cohorts Mostafavi, Hakhamanesh; Berisa, Tomaz; Day, Felix R.; Perry, John R. B.; Przeworski, Molly F.; Pickrell, Joseph K. 2017 Articles GeneticsEvolutionary geneticsViability (Biology)Genetic epidemiology
27. Mechanisms of sexually dimorphic development in the nervous system of Caenorhabditis elegans Weinberg, Peter J. 2017 Theses Caenorhabditis elegansDimorphism (Animals)NeurophysiologySexual dimorphism (Animals)Nervous systemReproductionNeurosciencesGenetics
28. Replication stress affects the fidelity of nucleosome-mediated epigenetic inheritance Li, Wenzhu; Yi, Jia; Agbu, Pamela; Zhou, Zheng; Kelley, Richard L.; Kallgren, Scott; Jia, Songtao; He, Xiangwei 2017 Articles DNA replicationEpigeneticsHeredityMolecular biologyGenetics
29. Statistical correction of the Winner’s Curse explains replication variability in quantitative trait genome-wide association studies Palmer, Cameron Douglas; Pe'er, Itshack G. 2017 Articles DNA replicationGenomes--Data processingHuman genetics--VariationGeneticsStatistics
30. A Genomic Map of the Effects of Linked Selection in Drosophila Elyashiv, Eyal; Sattath, Shmuel; Hu, Tina T.; Strutsovsky, Alon; McVicker, Graham; Andolfatto, Peter; Coop, Graham; Sella, Guy 2016 Articles Evolutionary geneticsBiodiversityNatural selection--Mathematical modelsGeneticsBiology
31. Interpreting the Dependence of Mutation Rates on Age and Time Gao, Ziyue; Wyman, Minyoung J.; Sella, Guy; Przeworski, Molly F. 2016 Articles DNA replicationCell divisionCells--Growth--Mathematical modelsDNA repairMutation (Biology)GeneticsBiologyCytology
32. Novel negative regulation of LIN-12/Notch in Caenorhabditis elegans Deng, Yuting 2016 Theses Caenorhabditis elegans--GeneticsGeneticsCaenorhabditis elegans
33. XRN2 Links Transcription Termination to DNA Damage and Replication Stress Morales, Julio C.; Richard, Patricia; Patidar, Praveen L.; Motea, Edward A.; Dang, Tuyen T.; Manley, James L.; Boothman, David A. 2016 Articles DNA damageGenetic transcriptionSmall interfering RNAGeneticsMolecular biology
34. Deciphering End Resection in Double-Strand Break repair in Saccharomyces cerevisiae Chen, Huan 2015 Theses Saccharomyces cerevisiaeDNA repairDNA damageBiologyMolecular biologyGenetics
35. Deciphering the Role of p24 Proteins in COPII-mediated Protein Secretion D'Arcangelo, Jennifer G. 2015 Theses Endoplasmic reticulumMolecular geneticsProteins--SecretionCytologyMolecular biologyGenetics
36. Gene expression profiling leads to discovery of correlation of matrix metalloproteinase 11 and heparanase 2 in breast cancer progression Fu, Junjie; Khaybullin, Ravil; Zhang, Yanping; Xia, Amy; Qi, Xin 2015 Articles Biochemical markersBreast--Cancer--Genetic aspectsGene expression--ResearchGenetics
37. Genetic Basis of Neuronal Subtype Differentiation in Caenorhabditis elegans Zheng, Chaogu 2015 Theses Caenorhabditis elegans--GeneticsNeuronsDevelopmental neurobiologyNeurosciencesGenetics
38. Regulatory Logic of Pan-neuronal Gene Expression in Caenorhabditis elegans Stefanakis, Nikolaos 2015 Theses BiologyGenetics
39. Broadening horizons: holistic viewpoints from theBiology of Genomes Carr, Ambrose; Pe'er, Dana 2014 Articles Gene mapping--Computer programsGenetic polymorphismsGenetic transcription--RegulationGenetics
40. Characterizing a collective and dynamic component of chromatin immunoprecipitation enrichment profiles in yeast Ward, Lucas; Wang, Junbai; Bussemaker, Harmen J. 2014 Articles Protein bindingTranscription factorsGenetics
41. Concentration-Dependent Exchange of Replication Protein A on Single-Stranded DNA Revealed by Single-Molecule Imaging Gibb, Bryan; Ye, Ling Feng; Gergoudis, Stephanie C.; Kwon, YoungHo; Niu, Hengyao; Sung, Patrick; Greene, Eric C. 2014 Articles Protein bindingDNA--MetabolismSaccharomyces cerevisiae--GeneticsGenetics
42. Gene regulatory factors that control the identities of specific neuron types in Caenorhabditis elegans Zhang, Feifan 2014 Theses GeneticsBiology
43. Redefining the Caenorhabditis elegans DEG/ENaC Mechanosensory Channel Complex Chen, Yushu 2014 Theses NeurosciencesCytologyGenetics
44. The Proper Splicing of RNAi Factors Is Critical for Pericentric Heterochromatin Assembly in Fission Yeast Kallgren, Scott P.; Andrews, Stuart J.; Tadeo, Xavier; Hou, Haitong; Moresco, James J.; Tu, Patricia G.; Yates III, John R.; Nagy, Peter L.; Jia, Songtao 2014 Articles RNA intereferenceHeterochromatinRNA splicingGeneticsBiologyMolecular biology
45. The Role of Costal2 and its Collaborators in Regulation of Ci Processing and in Mediation of Response to Hedgehog in Drosophila Zadorozny, Eva Vladi 2014 Theses Genetics
46. A framework for systematic promoter motif discovery and expression profiling from high dimensional brain transcriptome data Lieberman, Jeremy A. 2013 Theses GeneticsNeurosciences
47. A Novel Platform to Perform Cancer-Relevant Synthetic Dosage Lethality Screens in Saccharomyces cerevisiae Dittmar, John 2013 Theses BioinformaticsBiologyGenetics
48. Convergent Evolution of Hyperswarming Leads to Impaired Biofilm Formation in Pathogenic Bacteria Sakhtah, Hassan; Dietrich, Lars 2013 Articles MicrobiologyBiochemistryGeneticsEvolution (Biology)
49. Elucidating the Biological Function of PWWP-Domain Containing Protein Complexes Reddy, Bharat 2013 Theses BiologyGeneticsMolecular biology
50. Environmental Stresses Disrupt Telomere Length Homeostasis Romano, Gal Hagit; Harari, Yaniv; Yehuda, Tal; Podhorzer, Ariel; Rubinstein, Linda; Shamir, Ron; Gottlieb, Assaf; Silberberg, Yael; Pe'er, Dana; Ruppin, Eytan; Sharan, Roded; Kupiec, Martin 2013 Articles HomeostasisTelomereStress (Physiology)GeneticsBiology--ClassificationBiology