1. Widespread 3D genome reorganization precedes programmed DNA rearrangement in Oxytricha trifallax Villano, Danylo Julian 2023 Theses BiologyMolecular biologyGeneticsGenomesCiliataRNAGene rearrangement
2. Watching the Replisome: Single-molecule Studies of Eukaryotic DNA Replication Duzdevich, Daniel 2017 Theses DNA replicationMolecular biologyCytologyEukaryotic cells--GeneticsBiologyBiophysics
3. UVSSA regulates transcription-coupled genome maintenance Liebau, Rowyn Church 2024 Theses Molecular biologyDNA damageDNA repairDNA replicationScaffold proteinsGenomesGenetic transcription--RegulationCancer--Genetic aspects
4. Using Genomic Transgenes and the CRISPR/Cas9 Gene Editing System to Understand How Hedgehog Signaling Regulates Costal2 and Cubitus Interruptus in Drosophila melanogaster Little, Jamie 2017 Theses BiologyHedgehog proteinsMolecular biologyGenes
5. Unraveling the link between the Mdm2-p53 axis and aging Wu, Danyi 2017 Theses BiologyMolecular biologyAgingp53 protein
6. Understanding the molecular, cellular, and circuit defects characterizing the early stages of Alzheimer’s disease Virga, Daniel Michael 2023 Theses NeurosciencesAlzheimer's disease--PathophysiologyAlzheimer's disease--EtiologyCytologyMolecular biologyNervous system--DiseasesHippocampus (Brain)SynapsesDendritesMitochondrial pathology
7. Trans-Acting Factors Affecting Retroviral Recoding Green, Lisa Christine 2012 Theses VirologyMolecular biology
8. The SWI/SNF chromatin remodeling complex promotes SQLE dependency in pancreatic cancer cells Alaghebandan Moinian, Bita 2024 Theses Molecular biologyCancer--Genetic aspectsOncologyPancreas--CancerAdenocarcinomaGene expressionCholesterol--SynthesisSqualene
9. The Roles of Splicing and H2A.Z in Chromatin Assembly Kallgren, Scott 2014 Theses Gene silencingCell differentiationRNA intereferenceChromatinMolecular biology
10. The Role of Mga in the Survival of Pluripotent Cells During Peri-implantation Development Washkowitz, Andrew 2013 Theses GeneticsMolecular biology
11. The Mre11-Rad50-Xrs2 Complex in the DNA Damage Response Oh, Julyun 2018 Theses BiologyGeneticsMolecular biologyDNA damageDNA repair
12. The Molecular Mechanism of Replication Independent Repair of DNA Interstrand Crosslinks Kato, Niyo 2018 Theses BiologyGeneticsDNA repairCrosslinking (Polymerization)Molecular biology
13. The functions of the RNA polymerase II CTD in transcription and RNA processing Hsin, Jing-Ping 2013 Theses Molecular biologyCytology
14. The Endoplasmic Spreading Mechanism of Fibroblasts: Showcasing the Integrated Cytoskeleton Lynch, Christopher D. 2012 Theses CytologyBiophysicsMolecular biology
15. Studies on the mechanisms that contribute to the endoplasmic reticulum quality control system in Saccharomyces cerevisiae Dorrington Quinones, Mariana 2011 Theses Molecular biologySaccharomyces cerevisiaeEndoplasmic reticulumProtein foldingProteins--Synthesis
16. Studies on RNA Regulation: From Enhancer RNAs to RBBP6 Isoform3 Chen, Yaqiong 2019 Theses Molecular biologyRNAGenetic regulationBiology
17. Studies on mammalian pre-mRNA splicing : connections to transcription and cancer David, Charles J. 2011 Theses BiochemistryMolecular biologyRNA splicingCancer--Genetic aspectsCancer cellsMammals--GeneticsGlycolysis
18. Structural studies of the yeast transcription termination complex Nrd1-Nab3-Sen1 Zhang, Yinglu 2019 Theses BiologyMolecular biologyBiochemistryRNA polymerasesGenetic transcription
19. Structural Studies of the Fungal pre-mRNA 3'-end Processing Machinery Jurado, Ashley Rae 2015 Theses ProteinsRNA splicingScission (Chemistry)Messenger RNAMolecular biologyBiologyBiochemistry
20. Structural and Biochemical Characterizations of the Symplekin-Ssu72-CTD Complex in Pre-mRNA 3' end Processing Xiang, Kehui 2013 Theses BiochemistryGenetic transcriptionRNA polymerasesBiologyMolecular biology
21. SPIDR: The development and application of a highly multiplexed CLIP-seq method Wolin, Erica 2023 Theses Molecular biologyRNA-protein interactionsRNA--Analysis
22. Shared Molecular Features of Inherited and Sporadic ALS/FTD Conlon, Erin Grace 2018 Theses BiochemistryGeneticsNeurosciencesAmyotrophic lateral sclerosisFrontotemporal dementiaMolecular biology
23. Serum Regulation of Inhibitor of DNA Binding/Differentiation 1 Expression by a BMP Pathway and BMP Responsive El Lewis, Thera Cathy 2013 Theses BiologyMolecular biology
24. Re-thinking the role of ribosomal proteins in the Mdm2-p53 axis Daftuar, Lilyn 2013 Theses Molecular biology
25. Regulation of Parkin Protein Levels by L-3,4-dihydroxyphenylalanine Kovalchuke, Lyudmila 2018 Theses Molecular biologyPathologyNeurosciencesParkinson's diseaseDopa
26. Regulation of alternative splicing and its connections to cancer Chen, Mo 2011 Theses BiologyMolecular biologyBiochemistryRNA splicingPyruvate kinaseCancer cellsExons (Genetics)Mammals--Genetics
27. Ras, p63 and breast cancer Yoh, Kathryn Elizabeth 2016 Theses Breast--CancerCarcinogenesisBreast--Cancer--EtiologyMesenchymeTumor suppressor proteinsOncologyMolecular biology
28. Proprioceptor subtype identity specified by limb-derived signals Norovich, Amy L. 2017 Theses NeurosciencesMolecular biologyProprioceptorsSensory neurons
29. Prohibitin Homology Domain Proteins in Caenorhabditis elegans Kratz, John Ernest 2010 Theses Molecular biologyMembrane proteinsCaenorhabditis elegans--GeneticsOlfactory sensorsChemotaxisDiacetyl
30. Nucleolar transcription and its connections to nucleolar homeostasis and mitochondrial stress responses Feng, Shuang 2022 Theses Molecular biologyNucleic acidsHomeostasisMitochondriaCarcinogenesisNervous system--Diseases
31. Non-canonical WDR33 Isoforms: Characterization, Regulation, and Functional Significances in STING-Mediated Innate Immune Responses Liu, Lizhi 2023 Theses Molecular biologyImmunologyBiochemistryAmino acid sequenceGene expressionMessenger RNAOligomerizationInterferon
32. Mutant p53 cooperates with the SWI/SNF chromatin remodeling complex to mediate VEGFR2 expression in breast cancer cells Pfister, Neil Thomas 2015 Theses Vascular endothelial growth factorsTranscription factorsMutation (Biology)OncologyMolecular biologyMedicine
33. Mutagenic Repair Outcomes of DNA Double-Strand Breaks Al-Zain, Amr M. 2021 Theses BiologyMolecular biologyDouble-stranded RNACancer--EtiologyCancer--Genetic aspectsGenomesMutagenesis
34. Molecular Basis for the Recognition of the Regulatory Stem-loop Structures in Eukaryotic Messenger RNAs Tan, Dazhi 2014 Theses Messenger RNARNA-protein interactionsEukaryotic cellsBiologyBiochemistryMolecular biology
35. Molecular Approaches to Targeting Oncogenic KRAS and Ferroptosis Feng, Huizhong 2019 Theses Molecular biologyBiochemistryCytologyBiochemical markersCancerCell death
37. Global Survey of Cell Death Mechanisms Reveals Metabolic Regulation of GPX4-Dependent Ferroptosis Shimada, Kencihi 2015 Theses HomeostasisMetabolismBioinformaticsPharmacologyCell deathMolecular biology
38. Function and Regulation of ALS/FTD-associated RNA Binding Protein FUS Tsai, Yueh-Lin 2021 Theses BiologyCytologyMolecular biologyRNA-protein interactionsAmyotrophic lateral sclerosisDementia
39. Elucidating the Biological Function of PWWP-Domain Containing Protein Complexes Reddy, Bharat 2013 Theses BiologyGeneticsMolecular biology
40. Designer Exons Inform a Biophysical Model for Exon Definition Arias, Mauricio A. 2013 Theses Exons (Genetics)Molecular biologyBiophysicsMessenger RNABiology
41. Deciphering the Role of p24 Proteins in COPII-mediated Protein Secretion D'Arcangelo, Jennifer G. 2015 Theses Endoplasmic reticulumMolecular geneticsProteins--SecretionCytologyMolecular biologyGenetics
42. Deciphering End Resection in Double-Strand Break repair in Saccharomyces cerevisiae Chen, Huan 2015 Theses Saccharomyces cerevisiaeDNA repairDNA damageBiologyMolecular biologyGenetics
43. Control of cellular plasticity during tissue remodeling in C. elegans Aghayeva, Ulkar 2019 Theses NeurosciencesMolecular biologyCaenorhabditis elegansTissue remodelingNeuroplasticity
44. A non-canonical Hippo signaling pathway regulates DeltaNp63 in cancer cells Low Calle, Ana Maria 2022 Theses Molecular biologySquamous cell carcinomaTranscription factors
45. Analysis of Conformational Continuum and Free-energy Landscapes from Manifold Embedding of Single-particle Cryo-EM Ensembles of Biomolecules Seitz, Evan Elliott 2022 Theses Molecular biologyBiomoleculesElectron microscopy—Data processingMachine learningRiemannian manifoldsGibbs' free energyPath analysis (Statistics)RibosomesCOVID-19 (Disease)--Data processing