1. Integration of Germline and Somatic Variation in Tumor Data Dewal, Ninad Pradeep 2011 Theses BioinformaticsComputer scienceGeneticsTumorsGerm cellsSomatic cells
2. A Novel Platform to Perform Cancer-Relevant Synthetic Dosage Lethality Screens in Saccharomyces cerevisiae Dittmar, John 2013 Theses BioinformaticsBiologyGenetics
3. Computational Inferences of Mutations Driving Mesenchymal Differentiation in Glioblastoma Chen, James C. 2013 Theses Mutation (Biology)Mesenchymal stem cells--DifferentiationSystems biologyRetinoblastomaBioinformaticsGeneticsBiology
4. Aberrantly Expressed CeRNAs Account for Missing Genomic Variability of Cancer Genes via MicroRNA-Mediated Interactions Chiu, Hua-Sheng 2014 Theses CarcinogenesisOncogenesBioinformaticsRNABiology--ClassificationGenetics
5. Identifying genes required for the formation of neurons from skin cells using forward genetic screens and whole genome sequencing in C. elegans Minevich, Gregory 2015 Theses Neurons--GrowthNeural stem cellsDevelopmental neurobiologyGene mappingGeneticsNeurosciencesBioinformatics
6. Confounding effects in gene expression and their impact on downstream analysis Lachmann, Alexander 2016 Theses Genetic regulationGenetic regulation--Data processingGene expressionGene expression--Data processingBioinformaticsGene regulatory networksGenetics
7. Genetics of ABCA4-associated Diseases and Retinitis Pigmentosa Xie, Yajing 2016 Theses Retinitis pigmentosaRetinitis pigmentosa--Genetic aspectsMedical geneticsRetinal degenerationGeneticsBioinformatics
8. Genomic and machine-learning analysis of germline variants in cancer Madubata, Chioma 2018 Theses BioinformaticsCytologyGeneticsMachine learningGerm cellsCancer
9. Quantitative Approaches to the Genomics of Clonal Evolution Zairis, Sakellarios 2018 Theses GeneticsBioinformaticsMathematicsGenomicsClones (Plants)Evolution (Biology)
10. Investigating the utility of exome sequencing for kidney disease Groopman, Emily 2019 Theses GeneticsBioinformaticsMedicineKidneys--DiseasesExomes
11. Systems Genetics of DNA Damage Tolerance – Cisplatin, RAD5 & CRISPR-mediated Nonsense Bryant, Eric Edward 2019 Theses GeneticsBioinformaticsBiology--ClassificationDNA damageCisplatinCRISPR (Genetics)
12. Electronic Health Record-Derived Phenotyping Models to Improve Genomic Research in Stroke Thangaraj, Phyllis Mary 2020 Theses BioinformaticsGeneticsCerebrovascular diseaseCerebrovascular disease--Risk factorsMedical records--Data processingMachine learning--Industrial applications
13. Mosaicism and the genetic architecture of congenital heart disease Hsieh, Alexander Lin 2020 Theses BioinformaticsGeneticsCongenital heart diseaseMosaicismDiseases--Causes and theories of causation
14. Mechanisms Underlying Phenotypic Heterogeneity in Simplex Autism Spectrum Disorders Chiang, Andrew Hann 2021 Theses GeneticsBiologyBioinformaticsAutism spectrum disorders--Genetic aspectsPhenotypeMutagenesis
15. Post-transcriptional gene expression regulation in developmental disorders Kitaygorodsky, Alexander 2021 Theses BioinformaticsGeneticsComputer scienceGene expressionGenomesNeural networks (Neurobiology)
16. Molecular and genetic effect of coding variants in human Zhao, Yige 2024 Theses GeneticsHuman genetics--VariationBioinformaticsHuman genomeAllelomorphismMachine learningAutism--Research