1. Causal machine learning for reliable real-world evidence generation in healthcare Zhang, Linying 2023 Theses BioinformaticsMachine learning--Industrial applicationsMedical records--Data processingMedical care--StatisticsEquality--Health aspects
2. Generating Reliable and Responsive Observational Evidence: Reducing Pre-analysis Bias Ostropolets, Anna 2023 Theses BioinformaticsDecision makingPhenotype
3. Genetic and environmental determinants of recombination in coronaviruses Diuk-Wasser, Maria 2023 Theses VirologyBioinformaticsEvolution (Biology)Coronaviruses--GeneticsCoronavirus infectionsMachine learning--Industrial applications
4. Genotype-Phenotype Correlation of T Cells from Aged and Alzheimer's Disease Subjects Dressman, Dallin 2023 Theses ImmunologyBioinformaticsNeurosciencesAlzheimer's disease--Genetic aspectsPhenotypeMicrogliaNucleotide sequenceGene expression--Research--Methodology
5. Identifying and Targeting Master Regulators of Drug Resistance in Lung Adenocarcinoma through Network Analysis of Tumor Transcriptomic Data Griffin, Aaron Timothy 2023 Theses BioinformaticsBiology--ClassificationStatisticsBiochemical markersLungs--CancerAdenocarcinomaDrug resistance in cancer cellsMachine learning--Industrial applicationsAmerican Society of Clinical OncologyMemorial Sloan-Kettering Cancer Center
6. Prediction of Human Gut Bacterial Secreted Proteins and their Interactions with Human Colonic Proteins Velez-Cortes, Florencia 2023 Theses BioinformaticsIntestines--MicrobiologyDigestive organs--BacteriologyBacteriology
7. The itaconate-driven immunometabolic response to S. aureus promotes persistent lung infection Tomlinson, Kira Leigh 2023 Theses MicrobiologyImmunologyBioinformaticsStaphylococcus aureus infectionsBiofilmsGlycolysisPneumoniaNeutrophils--Immunology
8. Using electronic health records to understand COVID-19 risks Ramlall, Vijendra 2023 Theses BioinformaticsCOVID-19 (Disease)--EpidemiologyCOVID-19 (Disease)--Data processingCOVID-19 (Disease)--Risk factorsRetinal degenerationBlood coagulation disorders
9. Common and rare genetic effects on the transcriptome and their contribution to human traits Einson, Jonah 2022 Theses BioinformaticsHuman genetics--VariationBiology--ClassificationHuman genomeGenetic regulation
10. Mind the developmental gap: Identifying adverse drug effects across childhood to evaluate biological mechanisms from growth and development Giangreco, Nicholas Paul 2022 Theses BioinformaticsDevelopmental biologyChild developmentDrugs--Safety measuresDrugs--ToxicologyMedical statistics
11. Myeloid Heterogeneity in the Hippocampus Chintamen, Sana 2022 Theses NeurosciencesImmunologyBioinformaticsHippocampus (Brain)Developmental neurobiologyMice as laboratory animalsMacrophages--ResearchMicroglia
12. Systems-Level Approaches to Understanding Protein Synthesis Metz, Jordan Benjamin 2022 Theses BiologyComputer scienceBioinformaticsNucleotide sequenceRibosomesProteins--Synthesis--RegulationRNA-protein interactionsAnimal models in research
13. A Comparative Analysis of Genome Rearrangement in Ciliates Feng, Yi 2021 Theses BiologyBioinformaticsEvolution (Biology)Gene rearrangementCiliata--GeneticsEuplotesGenetic code
14. Characterizing molecular drivers of clinical outcome in pediatric acute leukemias by systems biology and machine learning Alloy, Alexandre Paul 2021 Theses BioinformaticsLeukemia--Genetic aspectsLeukemia in childrenMachine learningAcute leukemia
15. Genetic regulatory variant effects across tissues and individuals Flynn, Elise Duboscq 2021 Theses BioinformaticsMedical geneticsGene expression--ResearchHuman genomeCoronary heart disease--Genetic aspectsCoronary arteriesPhenotype
16. Integration of Functional Genomic Data in Genetic Analysis Chen, Siying 2021 Theses BioinformaticsMedical genetics--ResearchHuman genomeEpigeneticsAutism spectrum disorders--Genetic aspects
17. Mechanisms Underlying Phenotypic Heterogeneity in Simplex Autism Spectrum Disorders Chiang, Andrew Hann 2021 Theses GeneticsBiologyBioinformaticsAutism spectrum disorders--Genetic aspectsPhenotypeMutagenesis
18. Metabolic evaluation of genetic and environmental contributors to Alzheimer’s disease Kalia, Vrinda 2021 Theses Environmental healthBioinformaticsToxicologyAlzheimer's disease--Genetic aspectsCaenorhabditis elegansAfrican AmericansCaribbean AmericansWhite people
19. Methods for modeling the dynamics of microbial communities Joseph, Tyler 2021 Theses BioinformaticsNucleotide sequenceMicrobiologyBiotic communitiesIrritable colon
20. Post-transcriptional gene expression regulation in developmental disorders Kitaygorodsky, Alexander 2021 Theses BioinformaticsGeneticsComputer scienceGene expressionGenomesNeural networks (Neurobiology)