1. BacCapSeq: a Platform for Diagnosis and Characterization of Bacterial Infections Allicock, Orchid M.; Guo, Cheng; Uhlemann, Anne-Catrin; Whittier, Susan; Chauhan, Lokendra V.; Garcia, Joel A.; Price, Adam R.; Morse, Stephen S.; Mishra, Nischay; Briese, Thomas; Lipkin, W. Ian 2018 Articles ImmunityImmunopathologyCommunicable diseases--PreventionPathology, CellularBacterial diseases--DiagnosisBacteria--IdentificationDrug resistance
2. Genomic and Geographic Context for the Evolution of High-Risk Carbapenem-Resistant Enterobacter cloacae Complex Clones ST171 and ST78 Gomez-Simmonds, Angela; Annavajhala, Medini; Wang, Z.; Macesic, Nenad; Hu, Yue; Giddins, Marla J.; O’Malley, Aidan; Toussaint, Nora C.; Whittier, Susan; Torres, Victor J.; Uhlemann, Anne-Catrin 2018 Articles GeomicrobiologyImmunologyMedicine, PreventiveDrug resistance in microorganismsEnterobacter cloacaeGenomics
3. Rapid gastrointestinal loss of Clostridial Clusters IV and XIVa in the ICU associates with an expansion of gut pathogens Livanos, Alexandra E.; Snider, Erik J.; Whittier, Susan; Chong, David H.; Wang, Timothy Cragin; Abrams, Julian A.; Freedberg, Daniel E. 2018 Articles Intensive care unitsClostridiumPathogenic microorganismsEnterococcusGastrointestinal system
4. Carbapenem-resistant Enterobacteriaceae colonization (CRE) and subsequent risk of infection and 90-day mortality in critically ill patients, an observational study McConville, Thomas Howe; Sullivan, Sean Berger; Gomez-Simmonds, Angela; Whittier, Susan; Uhlemann, Anne-Catrin 2017 Articles EnterobacteriaceaeIntensive care unitsMortalityPathology
5. MRSA Causing Infections in Hospitals in Greater Metropolitan New York: Major Shift in the Dominant Clonal Type between 1996 and 2014 de la Gandara, Maria Pardos; Curry, Marie; Berger, Judith; Burstein, David; Della-Latta, Phyllis; Kopetz, Virgina; Quale, John; Spitzer, Eric; Tan, Rexie; Urban, Carl; Wang, Guiqing; Whittier, Susan; de Lencastre, Herminia; Tomasz, Alexander 2016 Articles Methicillin resistanceStaphylococcus aureus infectionsPathologyEpidemiology
6. Genome Sequence of the Human Abscess Isolate Streptococcus intermedius BA1 Planet, Paul Joseph; Rampersaud, Ryan; Hymes, Saul R.; Whittier, Susan; Della-Latta, Phyllis; Narechania, Apurva; Daugherty, Sean C.; Santana-Cruz, Ivette; DeSalle, Robert; Ravel, Jacques; Ratner, Adam Jonathan 2013 Articles GeneticsMicrobiologyPathology