1. Bos taurus genome assembly Liu, Yue; Qin, Xiang; Song, Xing-Zhi; Jiang, Huaiyang; Shen, Yufeng; Durbin, K James; Lien, Sigbjørn; Kent, Matthew; Sodeland, Marte; Ren, Yanru; Zhang, Lan; Sodergren, Erica; Havlak, Paul; Worley, Kim; Weinstock, George; Gibbs, Richard 2009 Articles BioinformaticsGenetics
2. ABC Transporters and the Proteasome Complex Are Implicated in Susceptibility to Stevens–Johnson Syndrome and Toxic Epidermal Necrolysis across Multiple Drugs Nicoletti, Paola; Bansal, Mukesh; Lefebvre, Celine; Guarnieri, Paolo; Shen, Yufeng; Pe’er, Itsik; Califano, Andrea; Floratos, Aristidis 2015 Articles Drugs--Side effectsATP-binding cassette transportersGene expressionGenetic regulationApoptosisToxic epidermal necrolysisBiology--ClassificationBioinformaticsGenetics
3. SeqMule: automated pipeline for analysis of human exome/genome sequencing data Guo, Yunfei; Ding, Xiaolei; Shen, Yufeng; Lyon, Gholson J.; Wang, Kai 2015 Articles Genomes--Data processingGeneticsSoftware engineeringBioinformaticsSystems biology