1. SeqMule: automated pipeline for analysis of human exome/genome sequencing data Guo, Yunfei; Ding, Xiaolei; Shen, Yufeng; Lyon, Gholson J.; Wang, Kai 2015 Articles Genomes--Data processingGeneticsSoftware engineeringBioinformaticsSystems biology
2. Estimating heritability of drug-induced liver injury from common variants and implications for future study designs Overby, Casey Lynnette; Hripcsak, George M.; Shen, Yufeng 2014 Articles Human genome--ResearchLiver--Wounds and injuriesDrugs--Side effectsHereditySystems biologyBioinformatics
3. Characterizing Immunoglobulin Repertoire from Whole Blood by a Personal Genome Sequencer Gao, Fan; Lin, Edwin; Feng, Yaping; Mack, William J.; Shen, Yufeng; Wang, Kai 2013 Articles ImmunoglobulinsNucleotide sequenceMeningiomaBlood--AnalysisBioinformaticsImmunology
4. Bos taurus genome assembly Liu, Yue; Qin, Xiang; Song, Xing-Zhi; Jiang, Huaiyang; Shen, Yufeng; Durbin, K James; Lien, Sigbjørn; Kent, Matthew; Sodeland, Marte; Ren, Yanru; Zhang, Lan; Sodergren, Erica; Havlak, Paul; Worley, Kim; Weinstock, George; Gibbs, Richard 2009 Articles BioinformaticsGenetics
5. ABC Transporters and the Proteasome Complex Are Implicated in Susceptibility to Stevens–Johnson Syndrome and Toxic Epidermal Necrolysis across Multiple Drugs Nicoletti, Paola; Bansal, Mukesh; Lefebvre, Celine; Guarnieri, Paolo; Shen, Yufeng; Pe’er, Itsik; Califano, Andrea; Floratos, Aristidis 2015 Articles Drugs--Side effectsATP-binding cassette transportersGene expressionGenetic regulationApoptosisToxic epidermal necrolysisBiology--ClassificationBioinformaticsGenetics